3.9 Article

Genome sequence of the organohalide-respiring Dehalogenimonas alkenigignens type strain (IP3-3T)

Journal

STANDARDS IN GENOMIC SCIENCES
Volume 11, Issue -, Pages -

Publisher

BMC
DOI: 10.1186/s40793-016-0165-7

Keywords

Chloroflexi; Dehalococcoidia; Reductive dechlorination; 1,2-dichloroethane; 1,2-dichloropropane; 1,2,3-trichloropropane

Funding

  1. U.S. National Science Foundation [DGE-1247192]

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Dehalogenimonas alkenigignens IP3-3(T) is a strictly anaerobic, mesophilic, Gram negative staining bacterium that grows by organohalide respiration, coupling the oxidation of H-2 to the reductive dehalogenation of polychlorinated alkanes. Growth has not been observed with any non-polyhalogenated alkane electron acceptors. Here we describe the features of strain IP3-3(T) together with genome sequence information and its annotation. The 1,849,792 bp high-quality-draft genome contains 1936 predicted protein coding genes, 47 tRNA genes, a single large subunit rRNA (23S-5S) locus, and a single, orphan, small unit rRNA (16S) locus. The genome contains 29 predicted reductive dehalogenase genes, a large majority of which lack cognate genes encoding membrane anchoring proteins.

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