Population structure and acquisition of the vanB resistance determinant in German clinical isolates of Enterococcus faecium ST192

Evaluation of DiversiLab®, MLST and PFGE typing for discriminating clinical Enterococcus faecium isolates

(2015) Guido Werner et al.   JOURNAL OF MICROBIOLOGICAL METHODS

A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data

(2014) David Coil et al.   BIOINFORMATICS

A Multicentre Hospital Outbreak in Sweden Caused by Introduction of a vanB2 Transposon into a Stably Maintained pRUM-Plasmid in an Enterococcus faecium ST192 Clone

(2014) Audun Sivertsen et al.   PLoS One

Molecular Analysis of VanA Outbreak ofEnterococcus faeciumin Two Warsaw Hospitals: The Importance of Mobile Genetic Elements

(2014) Ewa Wardal et al.   Biomed Research International

Comparative analysis of the complete genome of an epidemic hospital sequence type 203 clone of vancomycin-resistant Enterococcus faecium

(2013) Margaret MC Lam et al.   BMC GENOMICS

Microevolutionary Events Involving Narrow Host Plasmids Influences Local Fixation of Vancomycin-Resistance in Enterococcus Populations

(2013) Ana R. Freitas et al.   PLoS One

Genomic Insights to Control the Emergence of Vancomycin-Resistant Enterococci

(2013) B. P. Howden et al.   mBio

Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes

(2012) Xiang Qin et al.   BMC MICROBIOLOGY

VarScan 2: Somatic mutation and copy number alteration discovery in cancer by exome sequencing

(2012) D. C. Koboldt et al.   GENOME RESEARCH

Comparative Analysis of the First Complete Enterococcus faecium Genome

(2012) M. M. C. Lam et al.   JOURNAL OF BACTERIOLOGY

Characterization of a Vancomycin-resistantEnterococcus faeciumOutbreak Caused by 2 Genetically Different Clones at a Neonatal Intensive Care Unit

(2012) Wee Gyo Lee et al.   Annals of Laboratory Medicine

Vancomycin-resistant vanB-type Enterococcus faecium isolates expressing varying levels of vancomycin resistance and being highly prevalent among neonatal patients in a single ICU

(2012) Guido Werner et al.   Antimicrobial Resistance and Infection Control

Clustering of polyclonal VanB-type vancomycin-resistant Enterococcus faecium in a low-endemic area was associated with CC17-genogroup strains harbouring transferable vanB2-Tn5382 and pRUM-like repA containing plasmids with axe-txe plasmid addiction system

(2011) EVA BJØRKENG et al.   APMIS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

A multiresistance megaplasmid pLG1 bearing a hylEfm genomic island in hospital Enterococcus faecium isolates

(2010) Jenny A. Laverde Gomez et al.   INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY

Host range of enterococcal vanA plasmids among Gram-positive intestinal bacteria

(2010) Guido Werner et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0

(2010) Stéphane Guindon et al.   SYSTEMATIC BIOLOGY

SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building

(2009) M. Gouy et al.   MOLECULAR BIOLOGY AND EVOLUTION

High Rates of Fecal Carriage of Nonenterococcal vanB in both Children and Adults

(2008) M. Graham et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY