Comparative analysis of plastid genomes of non-photosynthetic Ericaceae and their photosynthetic relatives
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Comparative analysis of plastid genomes of non-photosynthetic Ericaceae and their photosynthetic relatives
Authors
Keywords
-
Journal
Scientific Reports
Volume 6, Issue 1, Pages -
Publisher
Springer Nature
Online
2016-07-25
DOI
10.1038/srep30042
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Coevolution between Nuclear-Encoded DNA Replication, Recombination, and Repair Genes and Plastid Genome Complexity
- (2016) Jin Zhang et al. Genome Biology and Evolution
- Detecting and Characterizing the Highly Divergent Plastid Genome of the Nonphotosynthetic Parasitic PlantHydnora visseri(Hydnoraceae)
- (2016) Julia Naumann et al. Genome Biology and Evolution
- Complete Plastid Genome of the Recent Holoparasite Lathraea squamaria Reveals Earliest Stages of Plastome Reduction in Orobanchaceae
- (2016) Tahir H. Samigullin et al. PLoS One
- Streptophyte Terrestrialization in Light of Plastid Evolution
- (2016) Jan de Vries et al. TRENDS IN PLANT SCIENCE
- The complete chloroplast genome of parasitic flowering plant Monotropa hypopitys: extensive gene losses and size reduction
- (2016) Eugene V. Gruzdev et al. Mitochondrial DNA Part B-Resources
- Chloroplast RNA polymerases: Role in chloroplast biogenesis
- (2015) Thomas Börner et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- NDH expression marks major transitions in plant evolution and reveals coordinate intracellular gene loss
- (2015) Tracey A Ruhlman et al. BMC PLANT BIOLOGY
- The Plastomes of Two Species in the Endoparasite GenusPilostyles(Apodanthaceae) Each Retain Just Five or Six Possibly Functional Genes
- (2015) Sidonie Bellot et al. Genome Biology and Evolution
- The Highly Reduced Plastome of MycoheterotrophicSciaphila(Triuridaceae) Is Colinear with Its Green Relatives and Is under Strong Purifying Selection
- (2015) Vivienne K.Y. Lam et al. Genome Biology and Evolution
- Exploring the Limits for Reduction of Plastid Genomes: A Case Study of the Mycoheterotrophic Orchids Epipogium aphyllum and Epipogium roseum
- (2015) Mikhail I. Schelkunov et al. Genome Biology and Evolution
- Proposal of a Twin Aarginine Translocator System-Mediated Constraint against Loss of ATP Synthase Genes from Nonphotosynthetic Plastid Genomes
- (2015) Ryoma Kamikawa et al. MOLECULAR BIOLOGY AND EVOLUTION
- YCF1: A Green TIC: Response to the de Vries et al. Commentary: Figure 1.
- (2015) Masato Nakai PLANT CELL
- YCF1: A Green TIC?
- (2015) Jan de Vries et al. PLANT CELL
- Why chloroplasts and mitochondria retain their own genomes and genetic systems: Colocation for redox regulation of gene expression
- (2015) John F. Allen PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Mimosoid legume plastome evolution: IR expansion, tandem repeat expansions, and accelerated rate of evolution in clpP
- (2015) Diana V. Dugas et al. Scientific Reports
- The First Complete Chloroplast Genome Sequences in Actinidiaceae: Genome Structure and Comparative Analysis
- (2015) Xiaohong Yao et al. PLoS One
- Trimmomatic: a flexible trimmer for Illumina sequence data
- (2014) Anthony M. Bolger et al. BIOINFORMATICS
- InterProScan 5: genome-scale protein function classification
- (2014) P. Jones et al. BIOINFORMATICS
- RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
- (2014) Alexandros Stamatakis BIOINFORMATICS
- The Plastid Genome of Mycoheterotrophic Monocot Petrosavia stellaris Exhibits Both Gene Losses and Multiple Rearrangements
- (2014) Maria D. Logacheva et al. Genome Biology and Evolution
- Investigating the Path of Plastid Genome Degradation in an Early-Transitional Clade of Heterotrophic Orchids, and Implications for Heterotrophic Angiosperms
- (2014) Craig F. Barrett et al. MOLECULAR BIOLOGY AND EVOLUTION
- Possible Loss of the Chloroplast Genome in the Parasitic Flowering Plant Rafflesia lagascae (Rafflesiaceae)
- (2014) Jeanmaire Molina et al. MOLECULAR BIOLOGY AND EVOLUTION
- The Translational Apparatus of Plastids and Its Role in Plant Development
- (2014) Nadine Tiller et al. Molecular Plant
- The Largest Plastid Genome of Monocots: a Novel Genome Type Containing AT Residue Repeats in the Slipper Orchid Cypripedium japonicum
- (2014) Jung Sung Kim et al. PLANT MOLECULAR BIOLOGY REPORTER
- Data access for the 1,000 Plants (1KP) project
- (2014) Naim Matasci et al. GigaScience
- NextClip: an analysis and read preparation tool for Nextera Long Mate Pair libraries
- (2013) Richard M. Leggett et al. BIOINFORMATICS
- MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
- (2013) K. Katoh et al. MOLECULAR BIOLOGY AND EVOLUTION
- MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
- (2013) Koichiro Tamura et al. MOLECULAR BIOLOGY AND EVOLUTION
- Mechanisms of Functional and Physical Genome Reduction in Photosynthetic and Nonphotosynthetic Parasitic Plants of the Broomrape Family
- (2013) S. Wicke et al. PLANT CELL
- Potential Functional Replacement of the Plastidic Acetyl-CoA Carboxylase Subunit (accD) Gene by Recent Transfers to the Nucleus in Some Angiosperm Lineages
- (2013) M. Rousseau-Gueutin et al. PLANT PHYSIOLOGY
- The Plastid Genome of Najas flexilis: Adaptation to Submersed Environments Is Accompanied by the Complete Loss of the NDH Complex in an Aquatic Angiosperm
- (2013) Elena L. Peredo et al. PLoS One
- Balanced Gene Losses, Duplications and Intensive Rearrangements Led to an Unusual Regularly Sized Genome in Arbutus unedo Chloroplasts
- (2013) Fernando Martínez-Alberola et al. PLoS One
- Uncovering the Protein Translocon at the Chloroplast Inner Envelope Membrane
- (2013) S. Kikuchi et al. SCIENCE
- REAPR: a universal tool for genome assembly evaluation
- (2013) Martin Hunt et al. GENOME BIOLOGY
- The plastid genome of the mycoheterotrophic Corallorhiza striata (Orchidaceae) is in the relatively early stages of degradation
- (2012) Craig F. Barrett et al. AMERICAN JOURNAL OF BOTANY
- SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
- (2012) Anton Bankevich et al. JOURNAL OF COMPUTATIONAL BIOLOGY
- Plastid genome evolution in mycoheterotrophic Ericaceae
- (2012) Thomas Braukmann et al. PLANT MOLECULAR BIOLOGY
- Complete plastid genome sequence of Vaccinium macrocarpon: structure, gene content, and rearrangements revealed by next generation sequencing
- (2012) Diego Fajardo et al. Tree Genetics & Genomes
- Toward almost closed genomes with GapFiller
- (2012) Marten Boetzer et al. GENOME BIOLOGY
- Rampant Gene Loss in the Underground Orchid Rhizanthella gardneri Highlights Evolutionary Constraints on Plastid Genomes
- (2011) E. Delannoy et al. MOLECULAR BIOLOGY AND EVOLUTION
- The evolution of the plastid chromosome in land plants: gene content, gene order, gene function
- (2011) Susann Wicke et al. PLANT MOLECULAR BIOLOGY
- The Clp protease system; a central component of the chloroplast protease network
- (2010) Paul Dominic B. Olinares et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Structure and biogenesis of the chloroplast NAD(P)H dehydrogenase complex
- (2010) Lianwei Peng et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- webPRANK: a phylogeny-aware multiple sequence aligner with interactive alignment browser
- (2010) Ari Löytynoja et al. BMC BIOINFORMATICS
- The Effect of Insertions, Deletions, and Alignment Errors on the Branch-Site Test of Positive Selection
- (2010) W. Fletcher et al. MOLECULAR BIOLOGY AND EVOLUTION
- Extreme Reconfiguration of Plastid Genomes in the Angiosperm Family Geraniaceae: Rearrangements, Repeats, and Codon Usage
- (2010) M. M. Guisinger et al. MOLECULAR BIOLOGY AND EVOLUTION
- TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations
- (2010) Federico Abascal et al. NUCLEIC ACIDS RESEARCH
- Plastid ndh genes in plant evolution
- (2010) Mercedes Martín et al. PLANT PHYSIOLOGY AND BIOCHEMISTRY
- Functional characterization of the thylakoid Ndh complex phosphorylation by site-directed mutations in the ndhF gene
- (2009) Mercedes Martín et al. BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
- Circos: An information aesthetic for comparative genomics
- (2009) M. Krzywinski et al. GENOME RESEARCH
- Extensive Rearrangements in the Chloroplast Genome of Trachelium caeruleum Are Associated with Repeats and tRNA Genes
- (2008) Rosemarie C. Haberle et al. JOURNAL OF MOLECULAR EVOLUTION
- Substitution of the Gene for Chloroplast RPS16 Was Assisted by Generation of a Dual Targeting Signal
- (2008) M. Ueda et al. MOLECULAR BIOLOGY AND EVOLUTION
- Complete plastid genome sequence of the chickpea (Cicer arietinum) and the phylogenetic distribution of rps12 and clpP intron losses among legumes (Leguminosae)
- (2008) Robert K. Jansen et al. MOLECULAR PHYLOGENETICS AND EVOLUTION
- Functional Gene Losses Occur with Minimal Size Reduction in the Plastid Genome of the Parasitic Liverwort Aneura mirabilis
- (2007) N. J. Wickett et al. MOLECULAR BIOLOGY AND EVOLUTION
Discover Peeref hubs
Discuss science. Find collaborators. Network.
Join a conversationPublish scientific posters with Peeref
Peeref publishes scientific posters from all research disciplines. Our Diamond Open Access policy means free access to content and no publication fees for authors.
Learn More