Tree of life for the genera of Chinese vascular plants

An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG IV

(2016)   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

The Gnetales: Recent insights on their morphology, reproductive biology, chromosome numbers, biogeography, and divergence times

(2016) Stefanie M. Ickert-Bond et al.   Journal of Systematics and Evolution

Embracing the pteridophyte classification of Ren-Chang Ching using a generic phylogeny of Chinese ferns and lycophytes

(2016) Hong-Mei Liu   Journal of Systematics and Evolution

Resolving basal lamiid phylogeny and the circumscription of Icacinaceae with a plastome-scale data set

(2015) Gregory W. Stull et al.   AMERICAN JOURNAL OF BOTANY

Accelerating plant DNA barcode reference library construction using herbarium specimens: improved experimental techniques

(2015) Chao Xu et al.   Molecular Ecology Resources

A new taxonomic system of the Campanulaceae s.s.

(2015) De-Yuan Hong et al.   Journal of Systematics and Evolution

Are phylogenies derived from family-level supertrees robust for studies on macroecological patterns along environmental gradients?

(2015) Hong Qian et al.   Journal of Systematics and Evolution

Evolution of the eastern Asian-North American biogeographic disjunctions in ferns and lycophytes

(2015) Jian-Ying XIANG et al.   Journal of Systematics and Evolution

Chloroplast phylogenomics resolves key relationships in ferns

(2015) Jin-Mei Lu et al.   Journal of Systematics and Evolution

Phylogeny of Lamiidae

(2014) Nancy F. Refulio-Rodriguez et al.   AMERICAN JOURNAL OF BOTANY

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

From algae to angiosperms–inferring the phylogeny of green plants (Viridiplantae) from 360 plastid genomes

(2014) Brad R Ruhfel et al.   BMC EVOLUTIONARY BIOLOGY

Evolution and biogeography of gymnosperms

(2014) Xiao-Quan Wang et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Optimal Control of Transient Dynamics in Balanced Networks Supports Generation of Complex Movements

(2014) Guillaume Hennequin et al.   NEURON

Plant phylogeography in arid Northwest China: Retrospectives and perspectives

(2014) Hong-Hu MENG et al.   Journal of Systematics and Evolution

Evolutionary history and underlying adaptation of alpine plants on the Qinghai-Tibet Plateau

(2014) Jian-Quan LIU et al.   Journal of Systematics and Evolution

Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times

(2014) Liping Zeng et al.   Nature Communications

Evolutionary diversifications of plants on the Qinghai-Tibetan Plateau

(2014) Jun Wen et al.   Frontiers in Genetics

From capsules to nutlets-phylogenetic relationships in the Boraginales

(2013) Maximilian Weigend et al.   CLADISTICS

Plastome Sequences of Lygodium japonicum and Marsilea crenata Reveal the Genome Organization Transformation from Basal Ferns to Core Leptosporangiates

(2013) Lei Gao et al.   Genome Biology and Evolution

Discriminating plants using the DNA barcoderbcLb: an appraisal based on a large data set

(2013) Wenpan Dong et al.   Molecular Ecology Resources

phyloGenerator: an automated phylogeny generation tool for ecologists

(2013) William D. Pearse et al.   Methods in Ecology and Evolution

Exploring generic delimitation within the fern family Thelypteridaceae

(2012) Li-Juan He et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Highly conserved low-copy nuclear genes as effective markers for phylogenetic analyses in angiosperms

(2012) Ning Zhang et al.   NEW PHYTOLOGIST

Angiosperm phylogeny: 17 genes, 640 taxa

(2011) Douglas E. Soltis et al.   AMERICAN JOURNAL OF BOTANY

Five vicarious genera from Gondwana: the Velloziaceae as shown by molecules and morphology

(2011) Renato Mello-Silva et al.   ANNALS OF BOTANY

Algorithms, data structures, and numerics for likelihood-based phylogenetic inference of huge trees

(2011) Fernando Izquierdo-Carrasco et al.   BMC BIOINFORMATICS

Diversification of land plants: insights from a family-level phylogenetic analysis

(2011) Omar Fiz-Palacios et al.   BMC EVOLUTIONARY BIOLOGY

Plant molecular phylogeography in China and adjacent regions: Tracing the genetic imprints of Quaternary climate and environmental change in the world’s most diverse temperate flora

(2011) Ying-Xiong Qiu et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Comparative analysis of a large dataset indicates that internal transcribed spacer (ITS) should be incorporated into the core barcode for seed plants

(2011) et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Plant DNA barcoding in China

(2011) De-Zhu LI et al.   Journal of Systematics and Evolution

A Test of Seven Candidate Barcode Regions from the Plastome in Picea (Pinaceae)

(2010) Jin-Hua Ran et al.   Journal of Integrative Plant Biology

Angiosperm phylogeny inferred from sequences of four mitochondrial genes

(2010) Yin-Long QIU et al.   Journal of Systematics and Evolution

Mega-phylogeny approach for comparative biology: an alternative to supertree and supermatrix approaches

(2009) Stephen A Smith et al.   BMC EVOLUTIONARY BIOLOGY

Inferring phylogenies with incomplete data sets: a 5-gene, 567-taxon analysis of angiosperms

(2009) J Gordon Burleigh et al.   BMC EVOLUTIONARY BIOLOGY

An update of the Angiosperm Phylogeny Group classification for the orders and families of flowering plants: APG III

(2009)   BOTANICAL JOURNAL OF THE LINNEAN SOCIETY

The merging of community ecology and phylogenetic biology

(2009) Jeannine Cavender-Bares et al.   ECOLOGY LETTERS

Rosid radiation and the rapid rise of angiosperm-dominated forests

(2009) H. Wang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The PhyLoTA Browser: Processing GenBank for Molecular Phylogenetics Research

(2008) Michael J. Sanderson et al.   SYSTEMATIC BIOLOGY