Efficiency of methylated DNA immunoprecipitation bisulphite sequencing for whole-genome DNA methylation analysis

Epigenetics in autoimmune diseases: Pathogenesis and prospects for therapy

(2015) Zimu Zhang et al.   AUTOIMMUNITY REVIEWS

Exploring DNA methylation changes in promoter, intragenic, and intergenic regions as early and late events in breast cancer formation

(2015) Garth H. Rauscher et al.   BMC CANCER

DNA methylation abnormalities in congenital heart disease

(2015) Clara Serra-Juhé et al.   Epigenetics

Aberrant DNA methylation impacts gene expression and prognosis in breast cancer subtypes

(2015) Balázs Győrffy et al.   INTERNATIONAL JOURNAL OF CANCER

The alternative role of DNA methylation in splicing regulation

(2015) Galit Lev Maor et al.   TRENDS IN GENETICS

Base resolution methylome profiling: considerations in platform selection, data preprocessing and analysis

(2015) Zhifu Sun et al.   Epigenomics

DNA methylation profiling: comparison of genome-wide sequencing methods and the Infinium Human Methylation 450 Bead Chip

(2015) Denise L Walker et al.   Epigenomics

DNA Methylation Landscapes of Human Fetal Development

(2015) Roderick C. Slieker et al.   PLoS Genetics

Whole genome sequencing and methylome analysis of the wild guinea pig

(2014) Alexandra Weyrich et al.   BMC GENOMICS

Coverage recommendations for methylation analysis by whole-genome bisulfite sequencing

(2014) Michael J Ziller et al.   NATURE METHODS

Alzheimer's disease: early alterations in brain DNA methylation at ANK1, BIN1, RHBDF2 and other loci

(2014) Philip L De Jager et al.   NATURE NEUROSCIENCE

Performance Evaluation of Kits for Bisulfite-Conversion of DNA from Tissues, Cell Lines, FFPE Tissues, Aspirates, Lavages, Effusions, Plasma, Serum, and Urine

(2014) Emily Eva Holmes et al.   PLoS One

Overexpression of Cancer-Associated Genes via Epigenetic Derepression Mechanisms in Gynecologic Cancer

(2014) Hae Min Jeong et al.   Frontiers in Oncology

Analyzing the cancer methylome through targeted bisulfite sequencing

(2012) Eun-Joon Lee et al.   CANCER LETTERS

Epigenetic mechanisms in neurological disease

(2012) Mira Jakovcevski et al.   NATURE MEDICINE

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Functions of DNA methylation: islands, start sites, gene bodies and beyond

(2012) Peter A. Jones   NATURE REVIEWS GENETICS

A Comparison of the Whole Genome Approach of MeDIP-Seq to the Targeted Approach of the Infinium HumanMethylation450 BeadChip® for Methylome Profiling

(2012) Christine Clark et al.   PLoS One

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

(2011) Felix Krueger et al.   BIOINFORMATICS

Epigenetic Mechanisms in Cognition

(2011) Jeremy J. Day et al.   NEURON

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Evaluation of affinity-based genome-wide DNA methylation data: Effects of CpG density, amplification bias, and copy number variation

(2010) M. D. Robinson et al.   GENOME RESEARCH

Whole genome DNA methylation analysis based on high throughput sequencing technology

(2010) Ning Li et al.   METHODS

Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications

(2010) R Alan Harris et al.   NATURE BIOTECHNOLOGY

Quantitative comparison of genome-wide DNA methylation mapping technologies

(2010) Christoph Bock et al.   NATURE BIOTECHNOLOGY

Protocol matters: which methylome are you actually studying?

(2010) Mark D Robinson et al.   Epigenomics