Gypsum amendment to rice paddy soil stimulated bacteria involved in sulfur cycling but largely preserved the phylogenetic composition of the total bacterial community

Syntrophic Growth of Desulfovibrio alaskensis Requires Genes for H2and Formate Metabolism as Well as Those for Flagellum and Biofilm Formation

(2015) Lee R. Krumholz et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Different Bacterial Populations Associated with the Roots and Rhizosphere of Rice Incorporate Plant-Derived Carbon

(2015) Marcela Hernández et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Electron Transfer Budgets and Kinetics of Abiotic Oxidation and Incorporation of Aqueous Sulfide by Dissolved Organic Matter

(2015) Zhi-Guo Yu et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Dominance of sulfur-fueled iron oxide reduction in low-sulfate freshwater sediments

(2015) Colleen M Hansel et al.   ISME Journal

phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data

(2013) Paul J. McMurdie et al.   PLoS One

Sulfide as a soil phytotoxin—a review

(2013) Leon P. M. Lamers et al.   Frontiers in Plant Science

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Sulfate-reducing microorganisms in wetlands – fameless actors in carbon cycling and climate change

(2012) Michael Pester   Frontiers in Microbiology

Anaerobic, Nitrate-Dependent Oxidation of Pyrite Nanoparticles by Thiobacillus denitrificans

(2011) Julian Bosch et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Metaproteogenomic analysis of microbial communities in the phyllosphere and rhizosphere of rice

(2011) Claudia Knief et al.   ISME Journal

Sulfuritalea hydrogenivorans gen. nov., sp. nov., a facultative autotroph isolated from a freshwater lake

(2010) H. Kojima et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

The global methane cycle: recent advances in understanding the microbial processes involved

(2009) Ralf Conrad   Environmental Microbiology Reports

Suppression of rice methane emission by sulfate deposition in simulated acid rain

(2008) Vincent Gauci et al.   JOURNAL OF GEOPHYSICAL RESEARCH