Expression of a second open reading frame present in the genome of tick-borne encephalitis virus strain Neudoerfl is not detectable in infected cells

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

A single nucleotide mutation in NS2A of Japanese encephalitis-live vaccine virus (SA14-14-2) ablates NS1' formation and contributes to attenuation

(2012) Q. Ye et al.   JOURNAL OF GENERAL VIROLOGY

Non-canonical translation in RNA viruses

(2012) A. E. Firth et al.   JOURNAL OF GENERAL VIROLOGY

Japanese encephalitis virus NS1′ protein depends on pseudoknot secondary structure and is cleaved by caspase during virus infection and cell apoptosis

(2012) Jin Sun et al.   MICROBES AND INFECTION

ExPASy: SIB bioinformatics resource portal

(2012) P. Artimo et al.   NUCLEIC ACIDS RESEARCH

West Nile alternative open reading frame (N-NS4B/WARF4) is produced in infected West Nile Virus (WNV) cells and induces humoral response in WNV infected individuals

(2012) Giovanni Faggioni et al.   Virology Journal

HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment

(2011) Michael Remmert et al.   NATURE METHODS

Replication enhancer elements within the open reading frame of tick-borne encephalitis virus and their evolution within the Flavivirus genus

(2011) A. Tuplin et al.   NUCLEIC ACIDS RESEARCH

Functional RNA Elements in the Dengue Virus Genome

(2011) Leopoldo G. Gebhard et al.   Viruses-Basel

An Alignment Confidence Score Capturing Robustness to Guide Tree Uncertainty

(2010) O. Penn et al.   MOLECULAR BIOLOGY AND EVOLUTION

GUIDANCE: a web server for assessing alignment confidence scores

(2010) O. Penn et al.   NUCLEIC ACIDS RESEARCH

Tick-borne encephalitis: Pathogenesis and clinical implications

(2010) Daniel Růžek et al.   Travel Medicine and Infectious Disease

RNA elements within the 5' untranslated region of the West Nile virus genome are critical for RNA synthesis and virus replication

(2009) X. F. Li et al.   JOURNAL OF GENERAL VIROLOGY

Morphological changes in human neural cells following tick-borne encephalitis virus infection

(2009) D. Ruzek et al.   JOURNAL OF GENERAL VIROLOGY

NS1' of Flaviviruses in the Japanese Encephalitis Virus Serogroup Is a Product of Ribosomal Frameshifting and Plays a Role in Viral Neuroinvasiveness

(2009) E. B. Melian et al.   JOURNAL OF VIROLOGY

Variability of the Tick-Borne Encephalitis Virus Genome in the 5′ Noncoding Region Derived from Ticks Ixodes persulcatus and Ixodes pavlovskyi in Western Siberia

(2009) Eugene V. Chausov et al.   VECTOR-BORNE AND ZOONOTIC DISEASES

A conserved predicted pseudoknot in the NS2A-encoding sequence of West Nile and Japanese encephalitis flaviviruses suggests NS1' may derive from ribosomal frameshifting

(2009) Andrew E Firth et al.   Virology Journal

Structural and Functional Studies of the Promoter Element for Dengue Virus RNA Replication

(2008) M. F. Lodeiro et al.   JOURNAL OF VIROLOGY

Analysis of the effects of alterations in the tick-borne encephalitis virus 3′-noncoding region on translation and RNA replication using reporter replicons

(2008) Verena M. Hoenninger et al.   VIROLOGY

Identification of genetic determinants of a tick-borne flavivirus associated with host-specific adaptation and pathogenicity

(2008) Dana N. Mitzel et al.   VIROLOGY