Detection of a novel circovirus PCV3 in pigs with cardiac and multi-systemic inflammation

Detection and characterization of a novel genotype of porcine astrovirus 4 from nasal swabs from pigs with acute respiratory disease

(2016) Aiswaria Padmanabhan et al.   ARCHIVES OF VIROLOGY

Full-genome based molecular characterization of encephalitis-associated bovine astroviruses

(2016) Ilias G. Bouzalas et al.   INFECTION GENETICS AND EVOLUTION

Molecular investigations on the prevalence and viral load of enteric viruses in pigs from five European countries

(2016) Weiguang Zhou et al.   VETERINARY MICROBIOLOGY

Exploring the virome of cattle with non-suppurative encephalitis of unknown etiology by metagenomics

(2016) Daniel Wüthrich et al.   VIROLOGY

Identification of a second encephalitis-associated astrovirus in cattle

(2016) Torsten Seuberlich et al.   Emerging Microbes & Infections

The evidence of porcine hemagglutinating encephalomyelitis virus induced nonsuppurative encephalitis as the cause of death in piglets

(2016) Zi Li et al.   PeerJ

A gyrovirus infecting a sea bird

(2015) Linlin Li et al.   ARCHIVES OF VIROLOGY

Comparing viral metagenomics methods using a highly multiplexed human viral pathogens reagent

(2015) Linlin Li et al.   JOURNAL OF VIROLOGICAL METHODS

A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data

(2014) David Coil et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Neurotropic Astrovirus in Cattle with Nonsuppurative Encephalitis in Europe

(2014) Ilias G. Bouzalas et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Genomic Characterization of a Circovirus Associated with Fatal Hemorrhagic Enteritis in Dog, Italy

(2014) Nicola Decaro et al.   PLoS One

Porcine Circovirus

(2014) J. Ellis   VETERINARY PATHOLOGY

Characterization of Vascular Lesions in Pigs Affected by Porcine Circovirus Type 2–Systemic Disease

(2014) A. R. Resendes et al.   VETERINARY PATHOLOGY

What is for dinner? Viral metagenomics of US store bought beef, pork, and chicken

(2014) Wen Zhang et al.   VIROLOGY

Kraken: ultrafast metagenomic sequence classification using exact alignments

(2014) Derrick E Wood et al.   GENOME BIOLOGY

Porcine astrovirus viremia and high genetic variability in pigs on large holdings in Croatia

(2013) Dragan Brnić et al.   INFECTION GENETICS AND EVOLUTION

Pathology in Practice

(2013) Timothy L. Cushing et al.   JAVMA-JOURNAL OF THE AMERICAN VETERINARY MEDICAL ASSOCIATION

Evaluation of rapid and simple techniques for the enrichment of viruses prior to metagenomic virus discovery

(2013) Richard J. Hall et al.   JOURNAL OF VIROLOGICAL METHODS

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

A field guide to eukaryotic circular single-stranded DNA viruses: insights gained from metagenomics

(2012) Karyna Rosario et al.   ARCHIVES OF VIROLOGY

Detection and molecular characterization of Porcine astrovirus strains associated with swine diarrhea

(2012) Sunil K. Mor et al.   JOURNAL OF VETERINARY DIAGNOSTIC INVESTIGATION

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

First detection and analysis of a fish circovirus

(2011) M. Lorincz et al.   JOURNAL OF GENERAL VIROLOGY

RNAscope

(2011) Fay Wang et al.   JOURNAL OF MOLECULAR DIAGNOSTICS

Identification of a novel astrovirus in a domestic pig in Hungary

(2010) Gábor Reuter et al.   ARCHIVES OF VIROLOGY

Possible cross-species transmission of circoviruses and cycloviruses among farm animals

(2010) L. Li et al.   JOURNAL OF GENERAL VIROLOGY

Porcine Circovirus Type 2 and Porcine Circovirus-Associated Disease

(2009) J. Gillespie et al.   JOURNAL OF VETERINARY INTERNAL MEDICINE

Multiple Diverse Circoviruses Infect Farm Animals and Are Commonly Found in Human and Chimpanzee Feces

(2009) L. Li et al.   JOURNAL OF VIROLOGY