RNA interference is essential for cellular quiescence

Loss of the Mediator subunit Med20 affects transcription of tRNA and other non-coding RNA genes in fission yeast

(2016) Jonas O.P. Carlsten et al.   Biochimica et Biophysica Acta-Gene Regulatory Mechanisms

Rapid epigenetic adaptation to uncontrolled heterochromatin spreading

(2015) Jiyong Wang et al.   eLife

Dicer Promotes Transcription Termination at Sites of Replication Stress to Maintain Genome Stability

(2014) Stephane E. Castel et al.   CELL

Comparative Genomics Suggests That the Human Pathogenic Fungus Pneumocystis jirovecii Acquired Obligate Biotrophy through Gene Loss

(2014) Ousmane H. Cissé et al.   Genome Biology and Evolution

Prospective Identification and Purification of Quiescent Adult Neural Stem Cells from Their In Vivo Niche

(2014) Paolo Codega et al.   NEURON

The RFTS Domain of Raf2 Is Required for Cul4 Interaction and Heterochromatin Integrity in Fission Yeast

(2014) Sharon A. White et al.   PLoS One

Human memory T cells from the bone marrow are resting and maintain long-lasting systemic memory

(2014) A. Okhrimenko et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Normalcy of Dormancy: Common Themes in Microbial Quiescence

(2013) Emily S.C. Rittershaus et al.   Cell Host & Microbe

Ribosomal DNA and cellular senescence: new evidence supporting the connection between rDNA and aging

(2013) Austen R. D. Ganley et al.   FEMS YEAST RESEARCH

Homologous recombination as a mechanism to recognize repetitive DNA sequences in an RNAi pathway

(2013) Z. Zhang et al.   GENES & DEVELOPMENT

Elimination of shelterin components bypasses RNAi for pericentric heterochromatin assembly

(2013) X. Tadeo et al.   GENES & DEVELOPMENT

RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond

(2013) Stephane E. Castel et al.   NATURE REVIEWS GENETICS

Molecular regulation of stem cell quiescence

(2013) Tom H. Cheung et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Mediator regulates non-coding RNA transcription at fission yeast centromeres

(2013) Michael Thorsen et al.   Epigenetics & Chromatin

Quantitative Analysis of Fission Yeast Transcriptomes and Proteomes in Proliferating and Quiescent Cells

(2012) Samuel Marguerat et al.   CELL

Histone methyltransferases regulating rRNA gene dose and dosage control in Arabidopsis

(2012) F. Pontvianne et al.   GENES & DEVELOPMENT

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Genome Comparison of Barley and Maize Smut Fungi Reveals Targeted Loss of RNA Silencing Components and Species-Specific Presence of Transposable Elements

(2012) J. D. Laurie et al.   PLANT CELL

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Ndc80 Internal Loop Interacts with Dis1/TOG to Ensure Proper Kinetochore-Spindle Attachment in Fission Yeast

(2011) Kuo-Shun Hsu et al.   CURRENT BIOLOGY

Elimination of a specific histone H3K14 acetyltransferase complex bypasses the RNAi pathway to regulate pericentric heterochromatin functions

(2011) B. D. Reddy et al.   GENES & DEVELOPMENT

RNAi promotes heterochromatic silencing through replication-coupled release of RNA Pol II

(2011) Mikel Zaratiegui et al.   NATURE

Coordination of DNA replication and histone modification by the Rik1–Dos2 complex

(2011) Fei Li et al.   NATURE

Defects in RNA quality control factors reveal RNAi-independent nucleation of heterochromatin

(2011) Francisca E Reyes-Turcu et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Candida albicans Dicer (CaDcr1) is required for efficient ribosomal and spliceosomal RNA maturation

(2011) D. A. Bernstein et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Compatibility with Killer Explains the Rise of RNAi-Deficient Fungi

(2011) I. A. Drinnenberg et al.   SCIENCE

RNA Elimination Machinery Targeting Meiotic mRNAs Promotes Facultative Heterochromatin Formation

(2011) M. Zofall et al.   SCIENCE

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

Sex-induced silencing defends the genome of Cryptococcus neoformans via RNAi

(2010) X. Wang et al.   GENES & DEVELOPMENT

Dicer Is Associated with Ribosomal DNA Chromatin in Mammalian Cells

(2010) Lasse Sinkkonen et al.   PLoS One

Synergistic roles of the proteasome and autophagy for mitochondrial maintenance and chronological lifespan in fission yeast

(2010) Kojiro Takeda et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Quelling targets the rDNA locus and functions in rDNA copy number control

(2009) Germano Cecere et al.   BMC MICROBIOLOGY

Tdp1 protects against oxidative DNA damage in non-dividing fission yeast

(2009) Samia Ben Hassine et al.   EMBO JOURNAL

A SingledicerGene Is Required for Efficient Gene Silencing Associated with Two Classes of Small Antisense RNAs inMucor circinelloides

(2009) Juan P. de Haro et al.   EUKARYOTIC CELL

Mapping epigenetic mutations in fission yeast using whole-genome next-generation sequencing

(2009) D. V. Irvine et al.   GENOME RESEARCH

RNAi in Budding Yeast

(2009) I. A. Drinnenberg et al.   SCIENCE

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

(2009) Ben Langmead et al.   GENOME BIOLOGY

Epigenetic Control of rDNA Loci in Response to Intracellular Energy Status

(2008) Akiko Murayama et al.   CELL

RNA Interference Guides Histone Modification during the S Phase of Chromosomal Replication

(2008) Anna Kloc et al.   CURRENT BIOLOGY

urg1: A Uracil-Regulatable Promoter System for Fission Yeast with Short Induction and Repression Times

(2008) Stephen Watt et al.   PLoS One