Next-generation sequencing reveals differentially amplified tandem repeats as a major genome component of Northern Europe’s oldest Camellia japonica

Analysis of the giant genomes ofFritillaria(Liliaceae) indicates that a lack of DNA removal characterizes extreme expansions in genome size

(2015) Laura J. Kelly et al.   NEW PHYTOLOGIST

Thirteen Camellia chloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships

(2014) Hui Huang et al.   BMC EVOLUTIONARY BIOLOGY

The diversification and activity of hAT transposons in Musa genomes

(2014) Gerhard Menzel et al.   CHROMOSOME RESEARCH

Chromosomal organizations of major repeat families on potato (Solanum tuberosum) and further exploring in its sequenced genome

(2014) Xiaomin Tang et al.   MOLECULAR GENETICS AND GENOMICS

Boom-Bust Turnovers of Megabase-Sized Centromeric DNA in Solanum Species: Rapid Evolution of DNA Sequences Associated with Centromeres

(2014) H. Zhang et al.   PLANT CELL

Profiling of extensively diversified plant LINEs reveals distinct plant-specific subclades

(2014) Tony Heitkam et al.   PLANT JOURNAL

Repetitive Sequences in Plant Nuclear DNA: Types, Distribution, Evolution and Function

(2014) Shweta Mehrotra et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

Comparative molecular cytogenetic analyses of a major tandemly repeated DNA family and retrotransposon sequences in cultivated jute Corchorus species (Malvaceae)

(2013) Rabeya Begum et al.   ANNALS OF BOTANY

Genetic diversity of Camellia japonica (Theaceae), a species endangered to East Asia, detected by inter-simple sequence repeat (ISSR)

(2013) Li Lin et al.   BIOCHEMICAL SYSTEMATICS AND ECOLOGY

RepeatExplorer: a Galaxy-based web server for genome-wide characterization of eukaryotic repetitive elements from next-generation sequence reads

(2013) P. Novak et al.   BIOINFORMATICS

Three Potato Centromeres Are Associated with Distinct Haplotypes with or Without Megabase-Sized Satellite Repeat Arrays

(2013) L. Wang et al.   GENETICS

Correction: Conditionally Immortalized Mouse Embryonic Fibroblasts Retain Proliferative Activity without Compromising Multipotent Differentiation Potential

(2013) Enyi Huang et al.   PLoS One

The CentO satellite confers translational and rotational phasing on cenH3 nucleosomes in rice centromeres

(2013) T. Zhang et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Comparative analysis of tandem repeats from hundreds of species reveals unique insights into centromere evolution

(2013) Daniël P Melters et al.   GENOME BIOLOGY

Highly diverse chromoviruses of Beta vulgaris are classified by chromodomains and chromosomal integration

(2013) Beatrice Weber et al.   Mobile DNA

Expressed sequence tags from organ-specific cDNA libraries of tea (Camellia sinensis) and polymorphisms and transferability of EST-SSRs across Camellia species

(2012) Fumiya Taniguchi et al.   BREEDING SCIENCE

Repeatless and Repeat-Based Centromeres in Potato: Implications for Centromere Evolution

(2012) Z. Gong et al.   PLANT CELL

A sugar beet (Beta vulgarisL.) reference FISH karyotype for chromosome and chromosome-arm identification, integration of genetic linkage groups and analysis of major repeat family distribution

(2012) Susanne Paesold et al.   PLANT JOURNAL

Evolutionary reshuffling in the Errantivirus lineage Elbe within theBeta vulgarisgenome

(2012) Cora Wollrab et al.   PLANT JOURNAL

Dispersion of rDNA loci and its implications on intragenomic variability and phylogenetic studies in Camellia

(2012) Kunjupillai Vijayan et al.   SCIENTIA HORTICULTURAE

Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds

(2011) Cheng-Ying Shi et al.   BMC GENOMICS

Organisation of the plant genome in chromosomes

(2011) J. S. Pat Heslop-Harrison et al.   PLANT JOURNAL

Organization and Evolution of Subtelomeric Satellite Repeats in the Potato Genome

(2011) Giovana A. Torres et al.   G3-Genes Genomes Genetics

Diverse retrotransposon families and an AT-rich satellite DNA revealed in giant genomes of Fritillaria lilies

(2010) Kateřina Ambrožová et al.   ANNALS OF BOTANY

Graph-based clustering and characterization of repetitive sequences in next-generation sequencing data

(2010) Petr Novák et al.   BMC BIOINFORMATICS

Analysis of a c0t-1 library enables the targeted identification of minisatellite and satellite families in Beta vulgaris

(2010) Falk Zakrzewski et al.   BMC PLANT BIOLOGY

Repeat elements and the Arabidopsis DNA methylation landscape

(2010) F K Teixeira et al.   HEREDITY

CDD: a Conserved Domain Database for the functional annotation of proteins

(2010) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Molecular taxonomy of Camellia (Theaceae) inferred from nrITS sequences

(2009) K. Vijayan et al.   AMERICAN JOURNAL OF BOTANY

Unstable transmission of rice chromosomes without functional centromeric repeats in asexual propagation

(2009) Zhiyun Gong et al.   CHROMOSOME RESEARCH

Extrachromosomal Circular DNA in Eukaryotes: Possible Involvement in the Plasticity of Tandem Repeats

(2009) S. Cohen et al.   CYTOGENETIC AND GENOME RESEARCH

Characterization of a tandemly repeated subtelomeric sequence with inverted telomere repeats in maize

(2009) Jun Li et al.   GENOME

Long-term conservation vs high sequence divergence: the case of an extraordinarily old satellite DNA in bivalve mollusks

(2009) M Plohl et al.   HEREDITY

BNR - a LINE family fromBeta vulgaris- contains a RRM domain in open reading frame 1 and defines a L1 sub-clade present in diverse plant genomes

(2009) Tony Heitkam et al.   PLANT JOURNAL

Comparative Genomics and Molecular Dynamics of DNA Repeats in Eukaryotes

(2008) G.-F. Richard et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

Satellite DNAs between selfishness and functionality: Structure, genomics and evolution of tandem repeats in centromeric (hetero)chromatin

(2007) Miroslav Plohl et al.   GENE