Ammonium and nitrite oxidation at nanomolar oxygen concentrations in oxygen minimum zone waters

Size-fraction partitioning of community gene transcription and nitrogen metabolism in a marine oxygen minimum zone

(2015) Sangita Ganesh et al.   ISME Journal

Genomic and proteomic characterization of “CandidatusNitrosopelagicus brevis”: An ammonia-oxidizing archaeon from the open ocean

(2015) Alyson E. Santoro et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Hadal biosphere: Insight into the microbial ecosystem in the deepest ocean on Earth

(2015) Takuro Nunoura et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

LUMOS - A Sensitive and Reliable Optode System for Measuring Dissolved Oxygen in the Nanomolar Range

(2015) Philipp Lehner et al.   PLoS One

Aerobic Microbial Respiration In Oceanic Oxygen Minimum Zones

(2015) Tim Kalvelage et al.   PLoS One

Oxygen distribution and aerobic respiration in the north and south eastern tropical Pacific oxygen minimum zones

(2014) Laura Tiano et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Comparative genomics reveals adaptations of a halotolerant thaumarchaeon in the interfaces of brine pools in the Red Sea

(2014) David Kamanda Ngugi et al.   ISME Journal

Temporal dynamics of nitrogen loss in the coastal upwelling ecosystem off central Chile: Evidence of autotrophic denitrification through sulfide oxidation

(2014) Alexander Galán et al.   LIMNOLOGY AND OCEANOGRAPHY

A New Highly Sensitive Method to Assess Respiration Rates and Kinetics of Natural Planktonic Communities by Use of the Switchable Trace Oxygen Sensor and Reduced Oxygen Concentrations

(2014) Laura Tiano et al.   PLoS One

Nitrospina-like bacteria are the main drivers of nitrite oxidation in the seasonal upwelling area of the Eastern South Pacific (Central Chile ∼36°S)

(2014) Héctor A. Levipan et al.   Environmental Microbiology Reports

Oxygen at Nanomolar Levels Reversibly Suppresses Process Rates and Gene Expression in Anammox and Denitrification in the Oxygen Minimum Zone off Northern Chile

(2014) Tage Dalsgaard et al.   mBio

Implications of nitrate and nitrite isotopic measurements for the mechanisms of nitrogen cycling in the Peru oxygen deficient zone

(2013) Karen L. Casciotti et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Vertical partitioning of nitrogen-loss processes across the oxic-anoxic interface of an oceanic oxygen minimum zone

(2013) Loreto De Brabandere et al.   ENVIRONMENTAL MICROBIOLOGY

Nitrite oxidation in the upper water column and oxygen minimum zone of the eastern tropical North Pacific Ocean

(2013) J Michael Beman et al.   ISME Journal

Nitrogen cycling driven by organic matter export in the South Pacific oxygen minimum zone

(2013) Tim Kalvelage et al.   Nature Geoscience

The Genome of Nitrospina gracilis Illuminates the Metabolism and Evolution of the Major Marine Nitrite Oxidizer

(2013) Sebastian Lücker et al.   Frontiers in Microbiology

Widespread functional anoxia in the oxygen minimum zone of the Eastern South Pacific

(2012) Bo Thamdrup et al.   DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS

Anammox and denitrification in the oxygen minimum zone of the eastern South Pacific

(2012) Tage Dalsgaard et al.   LIMNOLOGY AND OCEANOGRAPHY

Quantification of ammonia oxidation rates and ammonia-oxidizing archaea and bacteria at high resolution in the Gulf of California and eastern tropical North Pacific Ocean

(2012) J. Michael Beman et al.   LIMNOLOGY AND OCEANOGRAPHY

Experimental Incubations Elicit Profound Changes in Community Transcription in OMZ Bacterioplankton

(2012) Frank J. Stewart et al.   PLoS One

Microbial oceanography of anoxic oxygen minimum zones

(2012) O. Ulloa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Insights on the marine microbial nitrogen cycle from isotopic approaches to nitrification

(2012) Karen L. Casciotti et al.   Frontiers in Microbiology

Abundance and phylogenetic identity of archaeoplankton in the permanent oxygen minimum zone of the eastern tropical South Pacific

(2011) Lucy Belmar et al.   FEMS MICROBIOLOGY ECOLOGY

Nitrite oxidation in the Namibian oxygen minimum zone

(2011) Jessika Füssel et al.   ISME Journal

A critical assessment of the occurrence and extend of oxygen contamination during anaerobic incubations utilizing commercially available vials

(2011) Loreto De Brabandere et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Determination of ultra-low oxygen concentrations in oxygen minimum zones by the STOX sensor

(2011) Niels Peter Revsbech et al.   LIMNOLOGY AND OCEANOGRAPHY-METHODS

Oxygen Sensitivity of Anammox and Coupled N-Cycle Processes in Oxygen Minimum Zones

(2011) Tim Kalvelage et al.   PLoS One

Adaptation of aerobic respiration to low O2 environments

(2011) H. Han et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Temporal variability and phylogenetic characterization of planktonic anammox bacteria in the coastal upwelling ecosystem off central Chile

(2011) Alexander Galán et al.   PROGRESS IN OCEANOGRAPHY

Search and clustering orders of magnitude faster than BLAST

(2010) Robert C. Edgar   BIOINFORMATICS

High diversity of ammonia-oxidizing archaea in permanent and seasonal oxygen-deficient waters of the eastern South Pacific

(2010) Verónica Molina et al.   ENVIRONMENTAL MICROBIOLOGY

Rates and regulation of anaerobic ammonium oxidation and denitrification in the Black Sea

(2010) Marlene M. Jensen et al.   LIMNOLOGY AND OCEANOGRAPHY

QIIME allows analysis of high-throughput community sequencing data

(2010) J Gregory Caporaso et al.   NATURE METHODS

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

(2010) C. B. Walker et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

A Cryptic Sulfur Cycle in Oxygen-Minimum-Zone Waters off the Chilean Coast

(2010) D. E. Canfield et al.   SCIENCE

Microbial community dynamics in a seasonally anoxic fjord: Saanich Inlet, British Columbia

(2009) Elena Zaikova et al.   ENVIRONMENTAL MICROBIOLOGY

Ammonia oxidation kinetics determine niche separation of nitrifying Archaea and Bacteria

(2009) Willm Martens-Habbena et al.   NATURE

Revising the nitrogen cycle in the Peruvian oxygen minimum zone

(2009) P. Lam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Vertical and horizontal extension of the oxygen minimum zone in the eastern South Pacific Ocean

(2008) Rosalino Fuenzalida et al.   DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY

Oxygen minimum zones in the eastern tropical Atlantic and Pacific oceans

(2008) Johannes Karstensen et al.   PROGRESS IN OCEANOGRAPHY

The Microbial Engines That Drive Earth's Biogeochemical Cycles

(2008) P. G. Falkowski et al.   SCIENCE

Expanding Oxygen-Minimum Zones in the Tropical Oceans

(2008) L. Stramma et al.   SCIENCE