Temperature-responsive in vitro RNA structurome ofYersinia pseudotuberculosis
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Title
Temperature-responsive in vitro RNA structurome ofYersinia pseudotuberculosis
Authors
Keywords
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Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 113, Issue 26, Pages 7237-7242
Publisher
Proceedings of the National Academy of Sciences
Online
2016-06-14
DOI
10.1073/pnas.1523004113
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Note: Only part of the references are listed.- Regulation of Bacterial Virulence by Csr (Rsm) Systems
- (2015) Christopher A. Vakulskas et al. MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS
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- (2015) Robert C. Spitale et al. NATURE
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- (2015) Andrea Blanka et al. Science Signaling
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- (2015) Aaron M. Nuss et al. PLoS Genetics
- Constitutive production of c-di-GMP is associated with mutations in a variant ofPseudomonas aeruginosawith altered membrane composition
- (2015) Andrea Blanka et al. Science Signaling
- Temperature-driven differential gene expression by RNA thermosensors
- (2014) Stefanie Sandra Krajewski et al. Biochimica et Biophysica Acta-Gene Regulatory Mechanisms
- The PqsR and RhlR Transcriptional Regulators Determine the Level of Pseudomonas Quinolone Signal Synthesis in Pseudomonas aeruginosa by Producing Two Different pqsABCDE mRNA Isoforms
- (2014) S. Brouwer et al. JOURNAL OF BACTERIOLOGY
- Landscape and variation of RNA secondary structure across the human transcriptome
- (2014) Yue Wan et al. NATURE
- Regulation of Pseudomonas aeruginosa virulence factors by two novel RNA thermometers
- (2014) M. V. Grosso-Becerra et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- RNA thermometer controls temperature-dependent virulence factor expression inVibrio cholerae
- (2014) Gregor G. Weber et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- A direct link between the global regulator PhoP and the Csr regulon inY. pseudotuberculosisthrough the small regulatory RNA CsrC
- (2014) Aaron M Nuss et al. RNA Biology
- Mod-seq: high-throughput sequencing for chemical probing of RNA structure
- (2014) J. Talkish et al. RNA
- How to find RNA thermometers
- (2014) Francesco Righetti et al. Frontiers in Cellular and Infection Microbiology
- Coregulation of host-adapted metabolism and virulence by pathogenic yersiniae
- (2014) Ann Kathrin Heroven et al. Frontiers in Cellular and Infection Microbiology
- A Decade of Riboswitches
- (2013) Alexander Serganov et al. CELL
- Yersinia pseudotuberculosisuses Ail and YadA to circumvent neutrophils by directing Yop translocation during lung infection
- (2013) Michelle K. Paczosa et al. CELLULAR MICROBIOLOGY
- Role for cis-Acting RNA Sequences in the Temperature-Dependent Expression of the Multiadhesive Lig Proteins in Leptospira interrogans
- (2013) J. Matsunaga et al. JOURNAL OF BACTERIOLOGY
- Cytotoxic Necrotizing Factor-Y BoostsYersiniaEffector Translocation by Activating Rac Protein
- (2013) Manuel Wolters et al. JOURNAL OF BIOLOGICAL CHEMISTRY
- Temperature triggers immune evasion by Neisseria meningitidis
- (2013) Edmund Loh et al. NATURE
- In vivo genome-wide profiling of RNA secondary structure reveals novel regulatory features
- (2013) Yiliang Ding et al. NATURE
- Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo
- (2013) Silvi Rouskin et al. NATURE
- Genome-wide mapping of RNA structure using nuclease digestion and high-throughput sequencing
- (2013) Yue Wan et al. Nature Protocols
- RNA-Mediated Thermoregulation of Iron-Acquisition Genes in Shigella dysenteriae and Pathogenic Escherichia coli
- (2013) Andrew B. Kouse et al. PLoS One
- The Cytotoxic Necrotizing Factor of Yersinia pseudotuberculosis (CNFY) Enhances Inflammation and Yop Delivery during Infection by Activation of Rho GTPases
- (2013) Janina Schweer et al. PLoS Pathogens
- Thermogenetic tools to monitor temperature-dependent gene expression in bacteria
- (2012) Birgit Klinkert et al. JOURNAL OF BIOTECHNOLOGY
- Genome-wide Measurement of RNA Folding Energies
- (2012) Yue Wan et al. MOLECULAR CELL
- Bacterial RNA thermometers: molecular zippers and switches
- (2012) Jens Kortmann et al. NATURE REVIEWS MICROBIOLOGY
- Regulatory Impact of RNA Secondary Structure across the Arabidopsis Transcriptome
- (2012) F. Li et al. PLANT CELL
- Global Analysis of RNA Secondary Structure in Two Metazoans
- (2012) Fan Li et al. Cell Reports
- Concerted Actions of a Thermo-labile Regulator and a Unique Intergenic RNA Thermosensor Control Yersinia Virulence
- (2012) Katja Böhme et al. PLoS Pathogens
- Yersinia pestis Ail: multiple roles of a single protein
- (2012) Anna M. Kolodziejek et al. Frontiers in Cellular and Infection Microbiology
- ViennaRNA Package 2.0
- (2011) Ronny Lorenz et al. Algorithms for Molecular Biology
- Regulation by Small RNAs in Bacteria: Expanding Frontiers
- (2011) Gisela Storz et al. MOLECULAR CELL
- Multiplexed RNA structure characterization with selective 2'-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)
- (2011) J. B. Lucks et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Ail Binding to Fibronectin Facilitates Yersinia pestis Binding to Host Cells and Yop Delivery
- (2010) T. M. Tsang et al. INFECTION AND IMMUNITY
- Multiple layers of control govern expression of the Escherichia coli ibpAB heat-shock operon
- (2010) L. C. Gaubig et al. MICROBIOLOGY-SGM
- Genome-wide measurement of RNA secondary structure in yeast
- (2010) Michael Kertesz et al. NATURE
- FragSeq: transcriptome-wide RNA structure probing using high-throughput sequencing
- (2010) Jason G Underwood et al. NATURE METHODS
- Genome-Wide Double-Stranded RNA Sequencing Reveals the Functional Significance of Base-Paired RNAs in Arabidopsis
- (2010) Qi Zheng et al. PLoS Genetics
- VARNA: Interactive drawing and editing of the RNA secondary structure
- (2009) Kévin Darty et al. BIOINFORMATICS
- Fast Mapping of Short Sequences with Mismatches, Insertions and Deletions Using Index Structures
- (2009) Steve Hoffmann et al. PLoS Computational Biology
- Intrinsic Thermal Sensing Controls Proteolysis of Yersinia Virulence Regulator RovA
- (2009) Katharina Herbst et al. PLoS Pathogens
- The Yersinia pestis Ail Protein Mediates Binding and Yop Delivery to Host Cells Required for Plague Virulence
- (2008) S. Felek et al. INFECTION AND IMMUNITY
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