Chromosome-level assembly ofArabidopsis thalianaLerreveals the extent of translocation and inversion polymorphisms
Published 2016 View Full Article
- Home
- Publications
- Publication Search
- Publication Details
Title
Chromosome-level assembly ofArabidopsis thalianaLerreveals the extent of translocation and inversion polymorphisms
Authors
Keywords
-
Journal
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Volume 113, Issue 28, Pages E4052-E4060
Publisher
Proceedings of the National Academy of Sciences
Online
2016-06-30
DOI
10.1073/pnas.1607532113
References
Ask authors/readers for more resources
Related references
Note: Only part of the references are listed.- Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum
- (2015) Robert VanBuren et al. NATURE
- Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
- (2015) Konstantin Berlin et al. NATURE BIOTECHNOLOGY
- DNA Crossover Motifs Associated with Epigenetic Modifications Delineate Open Chromatin Regions in Arabidopsis
- (2015) Shay Shilo et al. PLANT CELL
- Improving the Annotation of Arabidopsis lyrata Using RNA-Seq Data
- (2015) Vimal Rawat et al. PLoS One
- Juxtaposition of heterozygous and homozygous regions causes reciprocal crossover remodelling via interference during Arabidopsis meiosis
- (2015) Piotr A Ziolkowski et al. eLife
- SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information
- (2014) Marten Boetzer et al. BMC BIOINFORMATICS
- Species-wide Genetic Incompatibility Analysis Identifies Immune Genes as Hot Spots of Deleterious Epistasis
- (2014) Eunyoung Chae et al. CELL
- Genomic variation in Arabidopsis: tools and insights from next-generation sequencing
- (2014) Jesse D. Hollister CHROMOSOME RESEARCH
- Detection of genomic variations and DNA polymorphisms and impact on analysis of meiotic recombination and genetic mapping
- (2014) Ji Qi et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Analysis of a Plant Complex Resistance Gene Locus Underlying Immune-Related Hybrid Incompatibility and Its Occurrence in Nature
- (2014) Rubén Alcázar et al. PLoS Genetics
- Long-read, whole-genome shotgun sequence data for five model organisms
- (2014) Kristi E Kim et al. Scientific Data
- Patterns of population epigenomic diversity
- (2013) Robert J. Schmitz et al. NATURE
- Massive genomic variation and strong selection in Arabidopsis thaliana lines from Sweden
- (2013) Quan Long et al. NATURE GENETICS
- Anchoring and ordering NGS contig assemblies by population sequencing (POPSEQ)
- (2013) Martin Mascher et al. PLANT JOURNAL
- The genomic landscape of meiotic crossovers and gene conversions in Arabidopsis thaliana
- (2013) Erik Wijnker et al. eLife
- Hybrid error correction and de novo assembly of single-molecule sequencing reads
- (2012) Sergey Koren et al. NATURE BIOTECHNOLOGY
- Genome-Wide Analysis of DNA Methylation and Gene Expression Changes in Two Arabidopsis Ecotypes and Their Reciprocal Hybrids
- (2012) H. Shen et al. PLANT CELL
- Mind the Gap: Upgrading Genomes with Pacific Biosciences RS Long-Read Sequencing Technology
- (2012) Adam C. English et al. PLoS One
- Analysis of Arabidopsis genome-wide variations before and after meiosis and meiotic recombination by resequencing Landsberg erecta and all four products of a single meiosis
- (2011) P. Lu et al. GENOME RESEARCH
- The recombination landscape in Arabidopsis thaliana F2 populations
- (2011) P A Salomé et al. HEREDITY
- Multiple reference genomes and transcriptomes for Arabidopsis thaliana
- (2011) Xiangchao Gan et al. NATURE
- The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
- (2011) Tina T Hu et al. NATURE GENETICS
- Whole-genome sequencing of multiple Arabidopsis thaliana populations
- (2011) Jun Cao et al. NATURE GENETICS
- Genome-Wide Comparison of Nucleotide-Binding Site-Leucine-Rich Repeat-Encoding Genes in Arabidopsis
- (2011) Y.-L. Guo et al. PLANT PHYSIOLOGY
- Reference-guided assembly of four diverse Arabidopsis thaliana genomes
- (2011) K. Schneeberger et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Fast-forward genetics enabled by new sequencing technologies
- (2011) Korbinian Schneeberger et al. TRENDS IN PLANT SCIENCE
- Complex Evolutionary Events at a Tandem Cluster of Arabidopsis thaliana Genes Resulting in a Single-Locus Genetic Incompatibility
- (2011) Lisa M. Smith et al. PLoS Genetics
- Genome-Wide Crossover Distribution in Arabidopsis thaliana Meiosis Reveals Sex-Specific Patterns along Chromosomes
- (2011) Laurène Giraut et al. PLoS Genetics
- Scaffolding pre-assembled contigs using SSPACE
- (2010) Marten Boetzer et al. BIOINFORMATICS
- High-quality draft assemblies of mammalian genomes from massively parallel sequence data
- (2010) S. Gnerre et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- How and Why Chromosome Inversions Evolve
- (2010) Mark Kirkpatrick PLOS BIOLOGY
- Gene Transposition Causing Natural Variation for Growth in Arabidopsis thaliana
- (2010) Daniela Vlad et al. PLoS Genetics
- The Scale of Population Structure in Arabidopsis thaliana
- (2010) Alexander Platt et al. PLoS Genetics
- Divergent Evolution of Duplicate Genes Leads to Genetic Incompatibilities Within A. thaliana
- (2009) D. Bikard et al. SCIENCE
- Quantitative Trait Loci Mapping in Five New Large Recombinant Inbred Line Populations of Arabidopsis thaliana Genotyped With Consensus Single-Nucleotide Polymorphism Markers
- (2008) M. Simon et al. GENETICS
- Sequencing of natural strains of Arabidopsis thaliana with short reads
- (2008) S. Ossowski et al. GENOME RESEARCH
- Incremental steps toward incompatibility revealed by Arabidopsis epistatic interactions modulating salicylic acid pathway activation
- (2008) R. Alcazar et al. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
- Real-Time DNA Sequencing from Single Polymerase Molecules
- (2008) J. Eid et al. SCIENCE
Add your recorded webinar
Do you already have a recorded webinar? Grow your audience and get more views by easily listing your recording on Peeref.
Upload NowBecome a Peeref-certified reviewer
The Peeref Institute provides free reviewer training that teaches the core competencies of the academic peer review process.
Get Started