DockQ: A Quality Measure for Protein-Protein Docking Models

Finding correct protein–protein docking models using ProQDock

(2016) Sankar Basu et al.   BIOINFORMATICS

Toremifene interacts with and destabilizes the Ebola virus glycoprotein

(2016) Yuguang Zhao et al.   NATURE

Structure of a phleboviral envelope glycoprotein reveals a consolidated model of membrane fusion

(2016) Steinar Halldorsson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Uncleaved prefusion-optimized gp140 trimers derived from analysis of HIV-1 envelope metastability

(2016) Leopold Kong et al.   Nature Communications

Developmental Pathway of the MPER-Directed HIV-1-Neutralizing Antibody 10E8

(2016) Cinque Soto et al.   PLoS One

Large-scale model quality assessment for improving protein tertiary structure prediction

(2015) Renzhi Cao et al.   BIOINFORMATICS

Score_set: A CAPRI benchmark for scoring protein complexes

(2014) Marc F. Lensink et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

SwarmDock: a server for flexible protein–protein docking

(2013) Mieczyslaw Torchala et al.   BIOINFORMATICS

The scoring of poses in protein-protein docking: current capabilities and future directions

(2013) Iain H Moal et al.   BMC BIOINFORMATICS

Docking, scoring, and affinity prediction in CAPRI

(2013) Marc F. Lensink et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Improved model quality assessment using ProQ2

(2012) Arjun Ray et al.   BMC BIOINFORMATICS

New benchmark metrics for protein-protein docking methods

(2011) Mu Gao et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Performance of ZDOCK and ZRANK in CAPRI rounds 13-19

(2010) Howook Hwang et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS