Multi-Compartmentalisation in the MAPK Signalling Pathway Contributes to the Emergence of Oscillatory Behaviour and to Ultrasensitivity

Membrane Clustering and the Role of Rebinding in Biochemical Signaling

(2012) Andrew Mugler et al.   BIOPHYSICAL JOURNAL

Activated human hydroxy-carboxylic acid receptor-3 signals to MAP kinase cascades via the PLC-dependent PKC and MMP-mediated EGFR pathways

(2012) Q Zhou et al.   BRITISH JOURNAL OF PHARMACOLOGY

Dorsal-ventral patterning of the neural tube: A tale of three signals

(2012) Gwenvael Le Dréau et al.   Developmental Neurobiology

Computational modeling of cellular signaling processes embedded into dynamic spatial contexts

(2012) Bastian R Angermann et al.   NATURE METHODS

Stimulus-Specific Activation and Actin Dependency of Distinct, Spatially Separated ERK1/2 Fractions in A7r5 Smooth Muscle Cells

(2012) Susanne Vetterkind et al.   PLoS One

Oscillatory gene expression and somitogenesis

(2012) Ryoichiro Kageyama et al.   Wiley Interdisciplinary Reviews-Developmental Biology

Apoptosis signal-regulating kinase 1 is an intracellular inducer of p38 MAPK-mediated myogenic signalling in cardiac myoblasts

(2011) Tae Gyu Choi et al.   BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH

Substrate-Dependent Control of ERK Phosphorylation Can Lead to Oscillations

(2011) Ping Liu et al.   BIOPHYSICAL JOURNAL

Agent-based simulation of reactions in the crowded and structured intracellular environment: Influence of mobility and location of the reactants

(2011) Michael T Klann et al.   BMC Systems Biology

Different types of oscillations in Notch and Fgf signaling regulate the spatiotemporal periodicity of somitogenesis

(2011) Y. Niwa et al.   GENES & DEVELOPMENT

Inhibition of ERK oscillations by ionizing radiation and reactive oxygen species

(2010) Harish Shankaran et al.   MOLECULAR CARCINOGENESIS

Lipid Rafts As a Membrane-Organizing Principle

(2010) D. Lingwood et al.   SCIENCE

Simple, realistic models of complex biological processes: Positive feedback and bistability in a cell fate switch and a cell cycle oscillator

(2009) James E. Ferrell et al.   FEBS LETTERS

Positive- and negative-feedback regulations coordinate the dynamic behavior of the Ras-Raf-MEK-ERK signal transduction pathway

(2009) S.-Y. Shin et al.   JOURNAL OF CELL SCIENCE

Rapid and sustained nuclear–cytoplasmic ERK oscillations induced by epidermal growth factor

(2009) Harish Shankaran et al.   Molecular Systems Biology

Interlinking positive and negative feedback loops creates a tunable motif in gene regulatory networks

(2009) Xiao-Jun Tian et al.   PHYSICAL REVIEW E

Negative Feedback Governs Gonadotrope Frequency-Decoding of Gonadotropin Releasing Hormone Pulse-Frequency

(2009) Stefan Lim et al.   PLoS One

Positional Information Generated by Spatially Distributed Signaling Cascades

(2009) Javier Muñoz-García et al.   PLoS Computational Biology

K-Ras Nanoclustering Is Subverted by Overexpression of the Scaffold Protein Galectin-3

(2008) R. Shalom-Feuerstein et al.   CANCER RESEARCH

Oscillatory Phosphorylation of Yeast Fus3 MAP Kinase Controls Periodic Gene Expression and Morphogenesis

(2008) Zoe Hilioti et al.   CURRENT BIOLOGY

FGF induces oscillations of Hes1 expression and Ras/ERK activation

(2008) Kei Nakayama et al.   CURRENT BIOLOGY

Programming with models: modularity and abstraction provide powerful capabilities for systems biology

(2008) A. Mallavarapu et al.   Journal of the Royal Society Interface

Electrostatic Interactions Positively Regulate K-Ras Nanocluster Formation and Function

(2008) S. J. Plowman et al.   MOLECULAR AND CELLULAR BIOLOGY

Activation of the MAPK Module from Different Spatial Locations Generates Distinct System Outputs

(2008) Kerry Inder et al.   MOLECULAR BIOLOGY OF THE CELL

Robust, Tunable Biological Oscillations from Interlinked Positive and Negative Feedback Loops

(2008) T. Y.-C. Tsai et al.   SCIENCE

Antagonism and bistability in protein interaction networks

(2007) Mohsen Sabouri-Ghomi et al.   JOURNAL OF THEORETICAL BIOLOGY