Predominance of Single Prophage Carrying a CRISPR/cas System in “Candidatus Liberibacter asiaticus” Strains in Southern China

Genetic Diversity of the Indian Populations of ‘CandidatusLiberibacter asiaticus’ Based on the Tandem Repeat Variability in a Genomic Locus

(2015) Dilip Kumar Ghosh et al.   PHYTOPATHOLOGY

“Candidatus Liberibacter asiaticus” Prophage Late Genes May Limit Host Range and Culturability

(2014) Laura A. Fleites et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Characterization of “Candidatus Liberibacter Asiaticus” Populations by Double-Locus Analyses

(2014) X. Deng et al.   CURRENT MICROBIOLOGY

Unravelling the structural and mechanistic basis of CRISPR–Cas systems

(2014) John van der Oost et al.   NATURE REVIEWS MICROBIOLOGY

CDD: NCBI's conserved domain database

(2014) Aron Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH

Unique Features of a Japanese ‘Candidatus Liberibacter asiaticus’ Strain Revealed by Whole Genome Sequencing

(2014) Hiroshi Katoh et al.   PLoS One

Efficient genome editing in plants using a CRISPR/Cas system

(2013) Zhengyan Feng et al.   CELL RESEARCH

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

A bacteriophage encodes its own CRISPR/Cas adaptive response to evade host innate immunity

(2013) Kimberley D. Seed et al.   NATURE

Population Structures of ‘Candidatus Liberibacter asiaticus’ in Southern China

(2013) W. Ma et al.   PHYTOPATHOLOGY

Validation of ‘Variable Number of Tandem Repeat’-Based Approach for Examination of ‘Candidatus Liberibacter asiaticus’ Diversity and Its Applications for the Analysis of the Pathogen Populations in the Areas of Recent Introduction

(2013) Luis A. Matos et al.   PLoS One

Rapid evolution of the human gut virome

(2013) S. Minot et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Molecular characterization of a mosaic locus in the genome of 'Candidatus Liberibacter asiaticus'

(2012) Xuefeng Wang et al.   BMC MICROBIOLOGY

Primer3—new capabilities and interfaces

(2012) Andreas Untergasser et al.   NUCLEIC ACIDS RESEARCH

Reconstructing Viral Genomes from the Environment Using Fosmid Clones: The Case of Haloviruses

(2012) Inmaculada Garcia-Heredia et al.   PLoS One

The CRISPR Associated Protein Cas4 Is a 5′ to 3′ DNA Exonuclease with an Iron-Sulfur Cluster

(2012) Jing Zhang et al.   PLoS One

Diversity and Plasticity of the Intracellular Plant Pathogen and Insect Symbiont “Candidatus Liberibacter asiaticus” as Revealed by Hypervariable Prophage Genes with Intragenic Tandem Repeats

(2011) Lijuan Zhou et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systems

(2011) Kira S Makarova et al.   Biology Direct

The human gut virome: Inter-individual variation and dynamic response to diet

(2011) S. Minot et al.   GENOME RESEARCH

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

(2011) F. Sievers et al.   Molecular Systems Biology

Evolution and classification of the CRISPR–Cas systems

(2011) Kira S. Makarova et al.   NATURE REVIEWS MICROBIOLOGY

‘Ca.Liberibacter asiaticus’ Carries an Excision Plasmid Prophage and a Chromosomally Integrated Prophage That Becomes Lytic in Plant Infections

(2010) Shujian Zhang et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Guangdong and Florida Populations of ‘CandidatusLiberibacter asiaticus’ Distinguished by a Genomic Locus with Short Tandem Repeats

(2010) J. Chen et al.   PHYTOPATHOLOGY

Analysis of a Prophage Gene Frequency Revealed Population Variation of ‘Candidatus Liberibacter asiaticus’ from Two Citrus-Growing Provinces in China

(2010) Rui Liu et al.   PLANT DISEASE

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

BLAST+: architecture and applications

(2009) Christiam Camacho et al.   BMC BIOINFORMATICS

Complete Genome Sequence of Citrus Huanglongbing Bacterium, ‘CandidatusLiberibacter asiaticus’ Obtained Through Metagenomics

(2009) Yongping Duan et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

Sequestering from host and characterization of sequence of a ribosomal RNA operon (rrn) from “Candidatus Liberibacter asiaticus”

(2008) Xiaoling Deng et al.   MOLECULAR AND CELLULAR PROBES

Identification and Characterization of the Huanglongbing Bacterium in Pummelo from Multiple Locations in Guangdong, P. R. China

(2008) X. Deng et al.   PLANT DISEASE