Infiltration-RNAseq: transcriptome profiling of Agrobacterium-mediated infiltration of transcription factors to discover gene function and expression networks in plants

Regulation of anthocyanin and proanthocyanidin biosynthesis byMedicago truncatulabHLH transcription factor MtTT8

(2016) Penghui Li et al.   NEW PHYTOLOGIST

Metabolic engineering of proanthocyanidin production by repressing the isoflavone pathways and redirecting anthocyanidin precursor flux in legume

(2016) Penghui Li et al.   PLANT BIOTECHNOLOGY JOURNAL

Transient plant transformation mediated by Agrobacterium tumefaciens: Principles, methods and applications

(2015) Pavel Krenek et al.   BIOTECHNOLOGY ADVANCES

Transcriptional transitions in Nicotiana benthamiana leaves upon induction of oil synthesis by WRINKLED1 homologs from diverse species and tissues

(2015) Åsa Grimberg et al.   BMC PLANT BIOLOGY

An Upstream Open Reading Frame Is Essential for Feedback Regulation of Ascorbate Biosynthesis in Arabidopsis

(2015) William A. Laing et al.   PLANT CELL

Subspecialization of R2R3-MYB Repressors for Anthocyanin and Proanthocyanidin Regulation in Forage Legumes

(2015) Nick W. Albert   Frontiers in Plant Science

DMAP: differential methylation analysis package for RRBS and WGBS data

(2014) Peter A. Stockwell et al.   BIOINFORMATICS

Engineering anthocyanin biosynthesis in plants

(2014) Yang Zhang et al.   CURRENT OPINION IN PLANT BIOLOGY

Anthocyanin leaf markings are regulated by a family ofR2R3-MYBgenes in the genusTrifolium

(2014) Nick W. Albert et al.   NEW PHYTOLOGIST

A Conserved Network of Transcriptional Activators and Repressors Regulates Anthocyanin Pigmentation in Eudicots

(2014) Nick W. Albert et al.   PLANT CELL

Optimization and Utilization of Agrobacterium-mediated Transient Protein Production in Nicotiana

(2014) Moneim Shamloul et al.   Jove-Journal of Visualized Experiments

MTML-msBayes: Approximate Bayesian comparative phylogeographic inference from multiple taxa and multiple loci with rate heterogeneity

(2013) Wen Huang et al.   BMC BIOINFORMATICS

An R2R3 MYB transcription factor determines red petal colour in an Actinidia (kiwifruit) hybrid population

(2013) Lena G Fraser et al.   BMC GENOMICS

Carbon partitioning in tissues of a gain-of-function mutant (MYB75/PAP1-D) and a loss-of-function mutant (myb75-1) in Arabidopsis thaliana

(2013) Houman Fei et al.   Botany

The interacting MYB75 and KNAT7 transcription factors modulate secondary cell wall deposition both in stems and seed coat in Arabidopsis

(2013) Apurva Bhargava et al.   PLANTA

De Novo Transcriptome Sequence Assembly and Analysis of RNA Silencing Genes of Nicotiana benthamiana

(2013) Kenlee Nakasugi et al.   PLoS One

From landing lights to mimicry: the molecular regulation of flower colouration and mechanisms for pigmentation patterning

(2012) Kevin M. Davies et al.   FUNCTIONAL PLANT BIOLOGY

Gene Overexpression: Uses, Mechanisms, and Interpretation

(2012) G. Prelich   GENETICS

Fast gapped-read alignment with Bowtie 2

(2012) Ben Langmead et al.   NATURE METHODS

Agroinfiltration of intact leaves as a method for the transient and stable transformation of saponin producing Maesa lanceolata

(2012) Ahmad Faizal et al.   PLANT CELL REPORTS

Expression of the R2R3-MYB Transcription Factor TaMYB14 from Trifolium arvense Activates Proanthocyanidin Biosynthesis in the Legumes Trifolium repens and Medicago sativa

(2012) K. R. Hancock et al.   PLANT PHYSIOLOGY

MATE2 Mediates Vacuolar Sequestration of Flavonoid Glycosides and Glycoside Malonates inMedicago truncatula

(2011) Jian Zhao et al.   PLANT CELL

Agrobacterium-mediated transient expression in citrus leaves: a rapid tool for gene expression and functional gene assay

(2011) Jose F. L. Figueiredo et al.   PLANT CELL REPORTS

The Medicago FLOWERING LOCUS T Homolog, MtFTa1, Is a Key Regulator of Flowering Time

(2011) R. E. Laurie et al.   PLANT PHYSIOLOGY

High-Throughput Characterization of Plant Gene Functions by Using Gain-of-Function Technology

(2010) Youichi Kondou et al.   Annual Review of Plant Biology

Detection of gene pathways with predictive power for breast cancer prognosis

(2010) Shuangge Ma et al.   BMC BIOINFORMATICS

agriGO: a GO analysis toolkit for the agricultural community

(2010) Zhou Du et al.   NUCLEIC ACIDS RESEARCH

Noncanonical Translation Initiation of the Arabidopsis Flowering Time and Alternative Polyadenylation Regulator FCA

(2010) G. G. Simpson et al.   PLANT CELL

Rapid expression of transgenes driven by seed-specific constructs in leaf tissue: DHA production

(2010) James R Petrie et al.   Plant Methods

MYB75 Functions in Regulation of Secondary Cell Wall Formation in the Arabidopsis Inflorescence Stem

(2010) A. Bhargava et al.   PLANT PHYSIOLOGY

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

Light-induced vegetative anthocyanin pigmentation in Petunia

(2009) N. W. Albert et al.   JOURNAL OF EXPERIMENTAL BOTANY

Transient co-expression for fast and high-yield production of antibodies with human-likeN-glycans in plants

(2009) Louis-P. Vézina et al.   PLANT BIOTECHNOLOGY JOURNAL

MATE Transporters Facilitate Vacuolar Uptake of Epicatechin 3'-O-Glucoside for Proanthocyanidin Biosynthesis in Medicago truncatula and Arabidopsis

(2009) J. Zhao et al.   PLANT CELL

The LAP1 MYB transcription factor orchestrates anthocyanidin biosynthesis and glycosylation inMedicago

(2009) Gregory J. Peel et al.   PLANT JOURNAL

Hydrophobin Fusions for High-Level Transient Protein Expression and Purification in Nicotiana benthamiana

(2009) J. J. Joensuu et al.   PLANT PHYSIOLOGY

Agrobacterium-Mediated Transient Gene Expression and Silencing: A Rapid Tool for Functional Gene Assay in Potato

(2009) Pudota B. Bhaskar et al.   PLoS One

Development of a transient expression system in grapevine via agro-infiltration

(2008) M. Santos-Rosa et al.   PLANT CELL REPORTS

Regulation of the anthocyanin biosynthetic pathway by the TTG1/bHLH/Myb transcriptional complex in Arabidopsis seedlings

(2008) Antonio Gonzalez et al.   PLANT JOURNAL

PlantDB – a versatile database for managing plant research

(2008) Vivien Exner et al.   Plant Methods

Arabidopsis LEAFY COTYLEDON2 induces maturation traits and auxin activity: Implications for somatic embryogenesis

(2008) S. L. Stone et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA