Effects of Parental Temperature and Nitrate on Seed Performance are Reflected by Partly Overlapping Genetic and Metabolic Pathways

Genotype–phenotype modeling considering intermediate level of biological variation: a case study involving sensory traits, metabolites and QTLs in ripe tomatoes

(2015) Huange Wang et al.   Molecular BioSystems

MetaboAnalyst 3.0—making metabolomics more meaningful

(2015) Jianguo Xia et al.   NUCLEIC ACIDS RESEARCH

Network Analysis of Postharvest Senescence Process in Citrus Fruits Revealed by Transcriptomic and Metabolomic Profiling

(2015) Yuduan Ding et al.   PLANT PHYSIOLOGY

Closing the loop on the GABA shunt in plants: are GABA metabolism and signaling entwined?

(2015) Simon Michaeli et al.   Frontiers in Plant Science

Interaction between parental environment and genotype affects plant and seed performance in Arabidopsis

(2014) Hanzi He et al.   JOURNAL OF EXPERIMENTAL BOTANY

Maternal temperature history activates Flowering Locus T in fruits to control progeny dormancy according to time of year

(2014) Min Chen et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The role of photosynthesis and amino acid metabolism in the energy status during seed development

(2014) Gad Galili et al.   Frontiers in Plant Science

Physiological aspects of raffinose family oligosaccharides in plants: protection against abiotic stress

(2013) A. I. ElSayed et al.   PLANT BIOLOGY

Differential control of seed primary dormancy in Arabidopsis ecotypes by the transcription factor SPATULA

(2013) F. E. Vaistij et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Arabidopsis GROWTH-REGULATING FACTOR7 Functions as a Transcriptional Repressor of Abscisic Acid- and Osmotic Stress-Responsive Genes, Including DREB2A

(2012) J.-S. Kim et al.   PLANT CELL

Untargeted Metabolic Quantitative Trait Loci Analyses Reveal a Relationship between Primary Metabolism and Potato Tuber Quality

(2012) N. Carreno-Quintero et al.   PLANT PHYSIOLOGY

Integrative Comparative Analyses of Transcript and Metabolite Profiles from Pepper and Tomato Ripening and Development Stages Uncovers Species-Specific Patterns of Network Regulatory Behavior

(2012) S. Osorio et al.   PLANT PHYSIOLOGY

Identification of an abscisic acid transporter by functional screening using the receptor complex as a sensor

(2012) Y. Kanno et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Network analysis: tackling complex data to study plant metabolism

(2012) David Toubiana et al.   TRENDS IN BIOTECHNOLOGY

Nitrate transceptor(s) in plants

(2011) A. Gojon et al.   JOURNAL OF EXPERIMENTAL BOTANY

MSClust: a tool for unsupervised mass spectra extraction of chromatography-mass spectrometry ion-wise aligned data

(2011) Y. M. Tikunov et al.   Metabolomics

A Wheat Homolog of MOTHER OF FT AND TFL1 Acts in the Regulation of Germination

(2011) Shingo Nakamura et al.   PLANT CELL

Induction of Dormancy in Arabidopsis Summer Annuals Requires Parallel Regulation of DOG1 and Hormone Metabolism by Low Temperature and CBF Transcription Factors

(2011) S. L. Kendall et al.   PLANT CELL

The Arabidopsis RING E3 Ubiquitin Ligase AtAIRP2 Plays Combinatory Roles with AtAIRP1 in Abscisic Acid-Mediated Drought Stress Responses

(2011) S. K. Cho et al.   PLANT PHYSIOLOGY

Targeted Enhancement of Glutamate-to- -Aminobutyrate Conversion in Arabidopsis Seeds Affects Carbon-Nitrogen Balance and Storage Reserves in a Development-Dependent Manner

(2011) A. Fait et al.   PLANT PHYSIOLOGY

Myo-inositol and beyond – Emerging networks under stress

(2011) Ravi Valluru et al.   PLANT SCIENCE

The Re-Establishment of Desiccation Tolerance in Germinated Arabidopsis thaliana Seeds and Its Associated Transcriptome

(2011) Julio Maia et al.   PLoS One

Genome-wide network model capturing seed germination reveals coordinated regulation of plant cellular phase transitions

(2011) G. W. Bassel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Nitrate-Regulated Auxin Transport by NRT1.1 Defines a Mechanism for Nutrient Sensing in Plants

(2010) Gabriel Krouk et al.   DEVELOPMENTAL CELL

MOTHER OF FT AND TFL1Regulates Seed Germination through a Negative Feedback Loop Modulating ABA Signaling inArabidopsis

(2010) Wanyan Xi et al.   PLANT CELL

A plant DNA ligase is an important determinant of seed longevity

(2010) Wanda M. Waterworth et al.   PLANT JOURNAL

Combined Transcript and Metabolite Profiling of Arabidopsis Grown under Widely Variant Growth Conditions Facilitates the Identification of Novel Metabolite-Mediated Regulation of Gene Expression

(2010) M. A. Hannah et al.   PLANT PHYSIOLOGY

Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana

(2010) D. C. Nelson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

MetAlign: Interface-Driven, Versatile Metabolomics Tool for Hyphenated Full-Scan Mass Spectrometry Data Preprocessing

(2009) Arjen Lommen   ANALYTICAL CHEMISTRY

System-wide molecular evidence for phenotypic buffering in Arabidopsis

(2009) Jingyuan Fu et al.   NATURE GENETICS

Completing the cycle: maternal effects as the missing link in plant life histories

(2009) K. Donohue   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

germinator: a software package for high-throughput scoring and curve fitting of Arabidopsis seed germination

(2009) Ronny V. L. Joosen et al.   PLANT JOURNAL

Deciphering Transcriptional and Metabolic Networks Associated with Lysine Metabolism during Arabidopsis Seed Development

(2009) R. Angelovici et al.   PLANT PHYSIOLOGY

Retention index thresholds for compound matching in GC–MS metabolite profiling

(2008) Nadine Strehmel et al.   JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES

The Arabidopsis Abscisic Acid Catabolic Gene CYP707A2 Plays a Key Role in Nitrate Control of Seed Dormancy

(2008) T. Matakiadis et al.   PLANT PHYSIOLOGY

Highway or byway: the metabolic role of the GABA shunt in plants

(2007) Aaron Fait et al.   TRENDS IN PLANT SCIENCE