Microbial community diversity and composition varies with habitat characteristics and biofilm function in macrophyte-rich streams

Macrophyte Complexity Controls Nutrient Uptake in Lowland Streams

(2015) Peter S. Levi et al.   ECOSYSTEMS

Cyanobacteria dominance influences resource use efficiency and community turnover in phytoplankton and zooplankton communities

(2014) Christopher T. Filstrup et al.   ECOLOGY LETTERS

Contrasting diversity of epibiotic bacteria and surrounding bacterioplankton of a common submerged macrophyte,Potamogeton crispus, in freshwater lakes

(2014) Dan He et al.   FEMS MICROBIOLOGY ECOLOGY

Fine-scale spatial patterns in bacterial community composition and function within freshwater ponds

(2014) Gavin Lear et al.   ISME Journal

Denitrification in a large river: consideration of geomorphic controls on microbial activity and community structure

(2013) Corianne Tatariw et al.   ECOLOGY

Both species sorting and neutral processes drive assembly of bacterial communities in aquatic microcosms

(2013) Jack E. Lee et al.   FEMS MICROBIOLOGY ECOLOGY

UPARSE: highly accurate OTU sequences from microbial amplicon reads

(2013) Robert C Edgar   NATURE METHODS

Molecular and functional ecology of aquatic microbial symbionts

(2013) Hans-Peter Grossart et al.   Frontiers in Microbiology

High Bacterial Diversity in Epilithic Biofilms of Oligotrophic Mountain Lakes

(2012) Mireia Bartrons et al.   MICROBIAL ECOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Multiple Stressors in Agricultural Streams: A Mesocosm Study of Interactions among Raised Water Temperature, Sediment Addition and Nutrient Enrichment

(2012) Jeremy J. Piggott et al.   PLoS One

Higher nitrate-reducer diversity in macrophyte-colonized compared to unvegetated freshwater sediment

(2012) Michael V.W. Kofoed et al.   SYSTEMATIC AND APPLIED MICROBIOLOGY

The Second Skin: Ecological Role of Epibiotic Biofilms on Marine Organisms

(2012) Martin Wahl et al.   Frontiers in Microbiology

Methanogen diversity and community composition in peatlands of the central to northern Appalachian Mountain region, North America

(2011) Joseph B. Yavitt et al.   BIOGEOCHEMISTRY

Multifunctionality and Diversity in Bacterial Biofilms

(2011) Hannes Peter et al.   PLoS One

Composition, uniqueness and variability of the epiphytic bacterial community of the green alga Ulva australis

(2010) Catherine Burke et al.   ISME Journal

Physical Heterogeneity Increases Biofilm Resource Use and Its Molecular Diversity in Stream Mesocosms

(2010) Gabriel Singer et al.   PLoS One

Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities

(2009) P. D. Schloss et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Community composition of bacterial biofilms on two submerged macrophytes and an artificial substrate in a pre-alpine lake

(2009) M Hempel et al.   AQUATIC MICROBIAL ECOLOGY

Nitrosomonas Nm143-like ammonia oxidizers and Nitrospira marina-like nitrite oxidizers dominate the nitrifier community in a marine aquaculture biofilm

(2009) Bärbel U. Foesel et al.   FEMS MICROBIOLOGY ECOLOGY

Sequencing technologies — the next generation

(2009) Michael L. Metzker   NATURE REVIEWS GENETICS

Geographical patterns of micro-organismal community structure: are diatoms ubiquitously distributed across boreal streams?

(2009) Jani Heino et al.   OIKOS

Comparative Analysis of Pyrosequencing and a Phylogenetic Microarray for Exploring Microbial Community Structures in the Human Distal Intestine

(2009) Marcus J. Claesson et al.   PLoS One

Conservative Fragments in Bacterial 16S rRNA Genes and Primer Design for 16S Ribosomal DNA Amplicons in Metagenomic Studies

(2009) Yong Wang et al.   PLoS One

Differences in nitrate uptake among benthic algal assemblages in a mountain stream

(2008) Michelle A. Baker et al.   JOURNAL OF THE NORTH AMERICAN BENTHOLOGICAL SOCIETY