The RING 2.0 web server for high quality residue interaction networks

The Victor C++ library for protein representation and advanced manipulation

(2014) L. Hirsh et al.   BIOINFORMATICS

Forces stabilizing proteins

(2014) C. Nick Pace et al.   FEBS LETTERS

CDKN2AUnclassified Variants in Familial Malignant Melanoma: Combining Functional and Computational Approaches for Their Assessment

(2014) Maria Chiara Scaini et al.   HUMAN MUTATION

Residue interaction network analysis of Dronpa and a DNA clamp

(2014) Guang Hu et al.   JOURNAL OF THEORETICAL BIOLOGY

Amino acid contact energy networks impact protein structure and evolution

(2014) Wenying Yan et al.   JOURNAL OF THEORETICAL BIOLOGY

MobiDB 2.0: an improved database of intrinsically disordered and mobile proteins

(2014) Emilio Potenza et al.   NUCLEIC ACIDS RESEARCH

A Distal Mutation Perturbs Dynamic Amino Acid Networks in Dihydrofolate Reductase

(2013) David D. Boehr et al.   BIOCHEMISTRY

A cartography of the van der Waals territories

(2013) Santiago Alvarez   DALTON TRANSACTIONS

Topological analysis and interactive visualization of biological networks and protein structures

(2012) Nadezhda T Doncheva et al.   Nature Protocols

RING: networking interacting residues, evolutionary information and energetics in protein structures

(2011) A. J. M. Martin et al.   BIOINFORMATICS

Analyzing and visualizing residue networks of protein structures

(2011) Nadezhda T. Doncheva et al.   TRENDS IN BIOCHEMICAL SCIENCES

Atomic Interaction Networks in the Core of Protein Domains and Their Native Folds

(2010) Venkataramanan Soundararajan et al.   PLoS One

Intra and Inter-Molecular Communications Through Protein Structure Network

(2009) Saraswathi Vishveshwara et al.   CURRENT PROTEIN & PEPTIDE SCIENCE

The Protein Folding Problem

(2008) Ken A. Dill et al.   Annual Review of Biophysics

Creative elements: network-based predictions of active centres in proteins and cellular and social networks

(2008) P CSERMELY   TRENDS IN BIOCHEMICAL SCIENCES