Inducible DamID systems for genomic mapping of chromatin proteins inDrosophila

Genome-wide Maps of Nuclear Lamina Interactions in Single Human Cells

(2015) Jop Kind et al.   CELL

SpDamID: Marking DNA Bound by Protein Complexes Identifies Notch-Dimer Responsive Enhancers

(2015) Matthew R. Hass et al.   MOLECULAR CELL

Genome-wide analysis links emerin to neuromuscular junction activity in Caenorhabditis elegans

(2014) Cristina González-Aguilera et al.   GENOME BIOLOGY

Developmental variation of the SUUR protein binding correlates with gene regulation and specific chromatin types in D. melanogaster

(2013) Daniil A. Maksimov et al.   CHROMOSOMA

Cell-Type-Specific Profiling of Gene Expression and Chromatin Binding without Cell Isolation: Assaying RNA Pol II Occupancy in Neural Stem Cells

(2013) Tony D. Southall et al.   DEVELOPMENTAL CELL

A Network Model of the Molecular Organization of Chromatin in Drosophila

(2013) Joke G. van Bemmel et al.   MOLECULAR CELL

Count-based differential expression analysis of RNA sequencing data using R and Bioconductor

(2013) Simon Anders et al.   Nature Protocols

Step-Wise Methylation of Histone H3K9 Positions Heterochromatin at the Nuclear Periphery

(2012) Benjamin D. Towbin et al.   CELL

Tissue-specific analysis of chromatin state identifies temporal signatures of enhancer activity during embryonic development

(2012) Stefan Bonn et al.   NATURE GENETICS

Directed Evolution of a Small-Molecule-Triggered Intein with Improved Splicing Properties in Mammalian Cells

(2011) Sun H. Peck et al.   CHEMISTRY & BIOLOGY

Direct targets of the D. melanogaster DSXF protein and the evolution of sexual development

(2011) S. D. Luo et al.   DEVELOPMENT

Interactions among Polycomb Domains Are Guided by Chromosome Architecture

(2011) Bas Tolhuis et al.   PLoS Genetics

Systematic Protein Location Mapping Reveals Five Principal Chromatin Types in Drosophila Cells

(2010) Guillaume J. Filion et al.   CELL

A Simple Method for Gene Expression and Chromatin Profiling of Individual Cell Types within a Tissue

(2010) Roger B. Deal et al.   DEVELOPMENTAL CELL

Molecular Maps of the Reorganization of Genome-Nuclear Lamina Interactions during Differentiation

(2010) Daan Peric-Hupkes et al.   MOLECULAR CELL

DamID in C. elegans reveals longevity-associated targets of DAF-16/FoxO

(2010) Eugene Schuster et al.   Molecular Systems Biology

Dicer associates with chromatin to repress genome activity in Schizosaccharomyces pombe

(2010) Katrina J Woolcock et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Insulator Protein SU(HW) Fine-Tunes Nuclear Lamina Interactions of the Drosophila Genome

(2010) Joke G. van Bemmel et al.   PLoS One

A genetic mosaic approach for neural circuit mapping in Drosophila

(2010) R. A. Bohm et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Differential expression analysis for sequence count data

(2010) Simon Anders et al.   GENOME BIOLOGY

High-resolution mapping of heterochromatin redistribution in a Drosophila position-effect variegation model

(2009) Maartje J Vogel et al.   Epigenetics & Chromatin

Organization and Function of the Blood Brain Barrier in Drosophila

(2008) T. Stork et al.   JOURNAL OF NEUROSCIENCE

Domain organization of human chromosomes revealed by mapping of nuclear lamina interactions

(2008) Lars Guelen et al.   NATURE