Genomic evolution and chemoresistance in germ-cell tumours

The 2016 WHO Classification of Tumours of the Urinary System and Male Genital Organs—Part A: Renal, Penile, and Testicular Tumours

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Drug-Induced Death Signaling Strategy Rapidly Predicts Cancer Response to Chemotherapy

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Oncotator: Cancer Variant Annotation Tool

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BH3 profiling identifies heterogeneous dependency on Bcl-2 family members in multiple myeloma and predicts sensitivity to BH3 mimetics

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Paired exome analysis of Barrett's esophagus and adenocarcinoma

(2015) Matthew D Stachler et al.   NATURE GENETICS

Whole-exome sequencing reveals the mutational spectrum of testicular germ cell tumours

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Genomic Characterization of Brain Metastases Reveals Branched Evolution and Potential Therapeutic Targets

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Presence of Somatic Mutations within PIK3CA, AKT, RAS, and FGFR3 but not BRAF in Cisplatin-Resistant Germ Cell Tumors

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Novel somatic and germline mutations in intracranial germ cell tumours

(2014) Linghua Wang et al.   NATURE

Discovery and saturation analysis of cancer genes across 21 tumour types

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Whole-exome sequencing and clinical interpretation of formalin-fixed, paraffin-embedded tumor samples to guide precision cancer medicine

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Testicular Cancer — Discoveries and Updates

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Cisplatin Induces Resistance by Triggering Differentiation of Testicular Embryonal Carcinoma Cells

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An oncofetal and developmental perspective on testicular germ cell cancer

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Cisplatin resistance in germ cell tumours: models and mechanisms

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Cisplatin Hypersensitivity of Testicular Germ Cell Tumors Is Determined by High Constitutive Noxa Levels Mediated by Oct-4

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High Mitochondrial Priming Sensitizes hESCs to DNA-Damage-Induced Apoptosis

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Dysregulation of the mitosis-meiosis switch in testicular carcinomain situ

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Mutational heterogeneity in cancer and the search for new cancer-associated genes

(2013) Michael S. Lawrence et al.   NATURE

Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples

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Pan-cancer patterns of somatic copy number alteration

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Discovery and characterization of artifactual mutations in deep coverage targeted capture sequencing data due to oxidative DNA damage during sample preparation

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Strelka: accurate somatic small-variant calling from sequenced tumor–normal sample pairs

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Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration

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Absolute quantification of somatic DNA alterations in human cancer

(2012) Scott L Carter et al.   NATURE BIOTECHNOLOGY

ContEst: estimating cross-contamination of human samples in next-generation sequencing data

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RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

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Pretreatment Mitochondrial Priming Correlates with Clinical Response to Cytotoxic Chemotherapy

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High-resolution DNA analysis of human embryonic stem cell lines reveals culture-induced copy number changes and loss of heterozygosity

(2010) Elisa Närvä et al.   NATURE BIOTECHNOLOGY

The Sequence Alignment/Map format and SAMtools

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Analysis of Gene Expression Profiles of Microdissected Cell Populations Indicates that Testicular Carcinoma In situ Is an Arrested Gonocyte

(2009) S. B. Sonne et al.   CANCER RESEARCH

Common variation in KITLG and at 5q31.3 predisposes to testicular germ cell cancer

(2009) Peter A Kanetsky et al.   NATURE GENETICS

A genome-wide association study of testicular germ cell tumor

(2009) Elizabeth A Rapley et al.   NATURE GENETICS