The genomic basis of circadian and circalunar timing adaptations in a midge

GWAS of 89,283 individuals identifies genetic variants associated with self-reporting of being a morning person

(2016) Youna Hu et al.   Nature Communications

Genome-wide association analysis identifies novel loci for chronotype in 100,420 individuals from the UK Biobank

(2016) Jacqueline M. Lane et al.   Nature Communications

Chronic Stress Induces Brain Region-Specific Alterations of Molecular Rhythms that Correlate with Depression-like Behavior in Mice

(2015) Ryan W. Logan et al.   BIOLOGICAL PSYCHIATRY

Structural plasticity of the circadian timing system. An overview from flies to mammals

(2015) Olivier Bosler et al.   FRONTIERS IN NEUROENDOCRINOLOGY

Chironomid Midges (Diptera, Chironomidae) Show Extremely Small Genome Sizes

(2015) Richard Cornette et al.   ZOOLOGICAL SCIENCE

Circadian Clock Dysfunction and Psychiatric Disease: Could Fruit Flies have a Say?

(2015) Mauro Agostino Zordan et al.   Frontiers in Neurology

Signaling to the microtubule cytoskeleton: An unconventional role for CaMKII

(2014) Derrick P. McVicker et al.   Developmental Neurobiology

CaMKII is essential for the cellular clock and coupling between morning and evening behavioral rhythms

(2014) N. Kon et al.   GENES & DEVELOPMENT

SNP2GO: Functional Analysis of Genome-Wide Association Studies

(2014) David Szkiba et al.   GENETICS

Rhythmic U2af26 Alternative Splicing Controls PERIOD1 Stability and the Circadian Clock in Mice

(2014) Marco Preußner et al.   MOLECULAR CELL

CaMKII: Claiming Center Stage in Postsynaptic Function and Organization

(2014) Johannes W. Hell   NEURON

Molecular Evolution of a Pervasive Natural Amino-Acid Substitution in Drosophila cryptochrome

(2014) Mirko Pegoraro et al.   PLoS One

Emerging role of CaMKII in neuropsychiatric disease

(2014) A.J. Robison   TRENDS IN NEUROSCIENCES

Comparative genome sequencing reveals genomic signature of extreme desiccation tolerance in the anhydrobiotic midge

(2014) Oleg Gusev et al.   Nature Communications

NextGenMap: fast and accurate read mapping in highly polymorphic genomes

(2013) Fritz J. Sedlazeck et al.   BIOINFORMATICS

Circadian and Circalunar Clock Interactions in a Marine Annelid

(2013) Juliane Zantke et al.   Cell Reports

DELLY: structural variant discovery by integrated paired-end and split-read analysis

(2012) T. Rausch et al.   BIOINFORMATICS

Genetic basis of human circadian rhythm disorders

(2012) Christopher R. Jones et al.   EXPERIMENTAL NEUROLOGY

A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff

(2012) Pablo Cingolani et al.   FLY

Genetic Architecture of Local Adaptation in Lunar and Diurnal Emergence Times of the Marine Midge Clunio marinus (Chironomidae, Diptera)

(2012) Tobias S. Kaiser et al.   PLoS One

LDx: Estimation of Linkage Disequilibrium from High-Throughput Pooled Resequencing Data

(2012) Alison F. Feder et al.   PLoS One

Toward almost closed genomes with GapFiller

(2012) Marten Boetzer et al.   GENOME BIOLOGY

Another place, another timer: Marine species and the rhythms of life

(2011) Kristin Tessmar-Raible et al.   BIOESSAYS

PoPoolation2: identifying differentiation between populations using sequencing of pooled DNA samples (Pool-Seq)

(2011) R. Kofler et al.   BIOINFORMATICS

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

(2011) Carson Holt et al.   BMC BIOINFORMATICS

Timing the tides: Genetic control of diurnal and lunar emergence times is correlated in the marine midge Clunio marinus

(2011) Tobias S Kaiser et al.   BMC GENETICS

A Mechanism for Tunable Autoinhibition in the Structure of a Human Ca2+/Calmodulin- Dependent Kinase II Holoenzyme

(2011) Luke H. Chao et al.   CELL

The Monarch Butterfly Genome Yields Insights into Long-Distance Migration

(2011) Shuai Zhan et al.   CELL

Depression Scores Associate With Chronotype and Social Jetlag in a Rural Population

(2011) Rosa Levandovski et al.   CHRONOBIOLOGY INTERNATIONAL

Full-length transcriptome assembly from RNA-Seq data without a reference genome

(2011) Manfred G Grabherr et al.   NATURE BIOTECHNOLOGY

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

(2011) Robert Kofler et al.   PLoS One

Signaling Mechanisms in Cortical Axon Growth, Guidance, and Branching

(2011) Katherine Kalil et al.   Frontiers in Neuroanatomy

Scaffolding pre-assembled contigs using SSPACE

(2010) Marten Boetzer et al.   BIOINFORMATICS

Drosophila timeless2 Is Required for Chromosome Stability and Circadian Photoreception

(2010) Clara Benna et al.   CURRENT BIOLOGY

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

(2010) A. McKenna et al.   GENOME RESEARCH

Coactivation of the CLOCK-BMAL1 complex by CBP mediates resetting of the circadian clock

(2010) Y. Lee et al.   JOURNAL OF CELL SCIENCE

Strong genetic differentiation and postglacial origin of populations in the marine midge Clunio marinus (Chironomidae, Diptera)

(2010) TOBIAS S. KAISER et al.   MOLECULAR ECOLOGY

Sleep and circadian rhythm disruption in psychiatric and neurodegenerative disease

(2010) Katharina Wulff et al.   NATURE REVIEWS NEUROSCIENCE

Intersubunit capture of regulatory segments is a component of cooperative CaMKII activation

(2010) Luke H Chao et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Velvet: Algorithms for de novo short read assembly using de Bruijn graphs

(2008) D. R. Zerbino et al.   GENOME RESEARCH

The genome of the model beetle and pest Tribolium castaneum

(2008) Stephen Richards et al.   NATURE

Molecular insights into human daily behavior

(2008) S. A. Brown et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA