Different roles of host and habitat in determining the microbial communities of plant-feeding true bugs

Evaluation of Sample Preservation Approaches for Better Insect Microbiome Research According to Next-Generation and Third-Generation Sequencing

(2021) Zi-Wen Yang et al.   MICROBIAL ECOLOGY

First record of the cimicomorphan family Plokiophilidae (Hemiptera, Heteroptera) from China, with description of a new species of Plokiophiloides

(2021) Jiuyang Luo et al.   ZooKeys

The Gut Microbiota of the Insect Infraorder Pentatomomorpha (Hemiptera: Heteroptera) for the Light of Ecology and Evolution

(2021) Hongwei Shan et al.   Microorganisms

Quantifying the Role of Ground Beetles for the Dispersal of Fusarium and Alternaria Fungi in Agricultural Landscapes

(2021) Nadja Heitmann et al.   Journal of Fungi

Similarities and spatial variations of bacterial and fungal communities in field rice planthopper (Hemiptera: Delphacidae) populationsh

(2020) Xiao-Li Bing et al.   Insect Science

Burkholderia insecticola triggers midgut closure in the bean bug Riptortus pedestris to prevent secondary bacterial infections of midgut crypts

(2020) Yoshitomo Kikuchi et al.   ISME Journal

Characterization of a novel Pantoea symbiont allows inference of a pattern of convergent genome reduction in bacteria associated with Pentatomidae

(2020) M. Kashkouli et al.   ENVIRONMENTAL MICROBIOLOGY

Ontogeny, species identity, and environment dominate microbiome dynamics in wild populations of kissing bugs (Triatominae)

(2020) Joel J. Brown et al.   Microbiome

Host-Plant Induced Shifts in Microbial Community Structure in Small Brown Planthopper, Laodelphax striatellus (Homoptera: Delphacidae)

(2020) Hai-Bo Pan et al.   JOURNAL OF ECONOMIC ENTOMOLOGY

Comparative cytology, physiology and transcriptomics of Burkholderia insecticola in symbiosis with the bean bug Riptortus pedestris and in culture

(2019) Tsubasa Ohbayashi et al.   ISME Journal

Characterizing members of the Cladosporium cladosporioides species complex as fruit rot pathogens of red raspberries in the mid-Atlantic and co-occurrence with Drosophila suzukii (spotted wing drosophila)

(2019) Cassandra L. Swett et al.   PHYTOPARASITICA

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

(2019) Evan Bolyen et al.   NATURE BIOTECHNOLOGY

Ecology and Evolution of Insect–Fungus Mutualisms

(2019) Peter H.W. Biedermann et al.   Annual Review of Entomology

Burkholderia gut symbiont modulates titer of specific juvenile hormone in the bean bug Riptortus pedestris

(2019) Junbeom Lee et al.   DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY

Repeated evolution of bacteriocytes in lygaeoid stinkbugs

(2019) Stefan Martin Kuechler et al.   ENVIRONMENTAL MICROBIOLOGY

Angiosperm to Gymnosperm host‐plant switch entails shifts in microbiota of the Welwitschia bug, Probergrothius angolensis (Distant, 1902)

(2019) Adam Javier Martinez et al.   MOLECULAR ECOLOGY

The Ruminococci: key symbionts of the gut ecosystem

(2018) Alex J. La Reau et al.   JOURNAL OF MICROBIOLOGY

Renewing Felsenstein’s phylogenetic bootstrap in the era of big data

(2018) F. Lemoine et al.   NATURE

Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

(2018) Andrew Rambaut et al.   SYSTEMATIC BIOLOGY

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin

(2018) Nicholas A. Bokulich et al.   Microbiome

Characterization of Overwintering Behaviors and Sites of Bean Bug, Riptortus pedestris (Hemiptera: Alydidae), Under Laboratory and Field Conditions

(2018) Minhyung Jung et al.   ENVIRONMENTAL ENTOMOLOGY

Functional metagenomics reveals abundant polysaccharide-degrading gene clusters and cellobiose utilization pathways within gut microbiota of a wood-feeding higher termite

(2018) Ning Liu et al.   ISME Journal

Bacterial community composition in the salivary glands of triatomines (Hemiptera: Reduviidae)

(2018) Michele Souza Lima et al.   PLoS Neglected Tropical Diseases

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

Riptortus pedestris and Burkholderia symbiont: an ideal model system for insect–microbe symbiotic associations

(2017) Kazutaka Takeshita et al.   RESEARCH IN MICROBIOLOGY

Symbiont Acquisition and Replacement as a Source of Ecological Innovation

(2017) Sailendharan Sudakaran et al.   TRENDS IN MICROBIOLOGY

Transfer of eleven species of the genus Burkholderia to the genus Paraburkholderia and proposal of Caballeronia gen. nov. to accommodate twelve species of the genera Burkholderia and Paraburkholderia

(2016) Anatoly P. Dobritsa et al.   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

DADA2: High-resolution sample inference from Illumina amplicon data

(2016) Benjamin J Callahan et al.   NATURE METHODS

Fungal identification biases in microbiome projects

(2016) Leho Tedersoo et al.   Environmental Microbiology Reports

A wide diversity ofPantoealineages are engaged in mutualistic symbiosis and cospeciation processes with stinkbugs

(2016) Olivier Duron et al.   Environmental Microbiology Reports

Obligate bacterial mutualists evolving from environmental bacteria in natural insect populations

(2016) Takahiro Hosokawa et al.   Nature Microbiology

Power and sample-size estimation for microbiome studies using pairwise distances and PERMANOVA

(2015) Brendan J. Kelly et al.   BIOINFORMATICS

Impact of Food Diversity on Biological Parameters ofApolygus lucorum(Hemiptera: Heteroptera: Miridae)

(2015) Yanrong Li et al.   FLORIDA ENTOMOLOGIST

Evolutionary transition in symbiotic syndromes enabled diversification of phytophagous insects on an imbalanced diet

(2015) Sailendharan Sudakaran et al.   ISME Journal

Gut microbes may facilitate insect herbivory of chemically defended plants

(2015) Tobin J. Hammer et al.   OECOLOGIA

Depth specialization in mesophotic corals (Leptoseris spp.) and associated algal symbionts in Hawai'i

(2015) X. Pochon et al.   Royal Society Open Science

Fungi in housefly (Musca domestica L.) as a disease risk indicator—A case study in South Africa

(2014) J.Z. Phoku et al.   ACTA TROPICA

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

(2014) Alexandros Stamatakis   BIOINFORMATICS

Symbiont-Supplemented Maternal Investment Underpinning Host’s Ecological Adaptation

(2014) Nahomi Kaiwa et al.   CURRENT BIOLOGY

The Crypt-Dwelling Primary Bacterial Symbiont of the Polyphagous Pentatomid PestHalyomorpha halys(Hemiptera: Pentatomidae)

(2014) Raman Bansal et al.   ENVIRONMENTAL ENTOMOLOGY

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Origin, acquisition and diversification of heritable bacterial endosymbionts in louse flies and bat flies

(2014) Olivier Duron et al.   MOLECULAR ECOLOGY

The Importance of Gut Symbionts in the Development of the Brown Marmorated Stink Bug, Halyomorpha halys (Stål)

(2014) Christopher M. Taylor et al.   PLoS One

Evolutionary origin of insect-Wolbachia nutritional mutualism

(2014) N. Nikoh et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

(2014) Remco Bouckaert et al.   PLoS Computational Biology

Symbiont polyphyly, co-evolution, and necessity in pentatomid stinkbugs from Costa Rica

(2014) Kalia S. I. Bistolas et al.   Frontiers in Microbiology

Horizontally Transmitted Symbionts and Host Colonization of Ecological Niches

(2013) Lee M. Henry et al.   CURRENT BIOLOGY

PERMANOVA, ANOSIM, and the Mantel test in the face of heterogeneous dispersions: What null hypothesis are you testing?

(2013) Marti J. Anderson et al.   ECOLOGICAL MONOGRAPHS

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Secondary structure models of 18S and 28S rRNAs of the true bugs based on complete rDNA sequences of Eurydema maracandica Oshanin, 1871 (Heteroptera, Pentatomidae)

(2013) Qiang Xie et al.   ZooKeys

Plant Defense Against Herbivores: Chemical Aspects

(2012) Axel Mithöfer et al.   Annual Review of Plant Biology

Actinobacteria as essential symbionts in firebugs and cotton stainers (Hemiptera, Pyrrhocoridae)

(2012) Hassan Salem et al.   ENVIRONMENTAL MICROBIOLOGY

Do diet and taxonomy influence insect gut bacterial communities?

(2012) D. R. Colman et al.   MOLECULAR ECOLOGY

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

(2012) Christian Quast et al.   NUCLEIC ACIDS RESEARCH

Birth-death skyline plot reveals temporal changes of epidemic spread in HIV and hepatitis C virus (HCV)

(2012) T. Stadler et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Characterization of an Obligate Intracellular Bacterium in the Midgut Epithelium of the Bulrush Bug Chilacis typhae (Heteroptera, Lygaeidae, Artheneinae)

(2011) Stefan Martin Kuechler et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Gut symbiotic bacteria in the cabbage bugs Eurydema rugosa and Eurydema dominulus (Heteroptera: Pentatomidae)

(2011) Yoshitomo Kikuchi et al.   APPLIED ENTOMOLOGY AND ZOOLOGY

Evolution of symbiotic organs and endosymbionts in lygaeid stinkbugs

(2011) Yu Matsuura et al.   ISME Journal

ggplot2: Elegant Graphics for Data Analysis

(2011) Cedric Ginestet   JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES A-STATISTICS IN SOCIETY

Phylogenetic Position and Peculiar Genetic Traits of a Midgut Bacterial Symbiont of the Stinkbug Parastrachia japonensis

(2010) T. Hosokawa et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

SequenceMatrix: concatenation software for the fast assembly of multi-gene datasets with character set and codon information

(2010) Gaurav Vaidya et al.   CLADISTICS

An ancient but promiscuous host–symbiont association between Burkholderia gut symbionts and their heteropteran hosts

(2010) Yoshitomo Kikuchi et al.   ISME Journal

Cellulolytic Systems in Insects

(2009) Hirofumi Watanabe et al.   Annual Review of Entomology

Temporal lags and overlap in the diversification of weevils and flowering plants

(2009) D. D. McKenna et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Wolbachia as a bacteriocyte-associated nutritional mutualist

(2009) T. Hosokawa et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Critical Evaluation of Two Primers Commonly Used for Amplification of Bacterial 16S rRNA Genes

(2008) J. A. Frank et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

PHYTOPHAGOUS INSECT–MICROBE MUTUALISMS AND ADAPTIVE EVOLUTIONARY DIVERSIFICATION

(2008) Eric M. Janson et al.   EVOLUTION

Eremothecium ashbyi causes soybean yeast-spot and is associated with stink bug, Riptortus  clavatus

(2008) Shigemitsu Kimura et al.   JOURNAL OF GENERAL PLANT PATHOLOGY