Structural basis for kinase inhibition in the tripartite E. coli HipBST toxin–antitoxin system

Functional diversification despite structural congruence in the HipBST toxin-antitoxin system of Legionella pneumophila

(2023) Jordan D. Lin et al.   mBio

Toxin-Antitoxin Systems as Phage Defense Elements

(2022) Michele LeRoux et al.   Annual Review of Microbiology

Molecular mechanism of toxin neutralization in the HipBST toxin-antitoxin system of Legionella pneumophila

(2022) Xiangkai Zhen et al.   Nature Communications

The Haemophilus influenzae HipBA toxin–antitoxin system adopts an unusual three-component regulatory mechanism

(2022) Ji Sung Koo et al.   IUCrJ

A high-flux automated laboratory small-angle X-ray scattering instrument optimized for solution scattering

(2021) Jeppe Lyngsø et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Highly accurate protein structure prediction with AlphaFold

(2021) John Jumper et al.   NATURE

Phylogeny Reveals Novel HipA-Homologous Kinase Families and Toxin-Antitoxin Gene Organizations

(2021) Kenn Gerdes et al.   mBio

Bistable Expression of a Toxin-Antitoxin System Located in a Cryptic Prophage of Escherichia coli O157:H7

(2021) Dukas Jurėnas et al.   mBio

(p)ppGpp and its role in bacterial persistence: New challenges

(2020) Olga Pacios et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Corrigendum to: IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era

(2020) Bui Quang Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Assessment of structure factors for analysis of small-angle scattering data from desired or undesired aggregates

(2020) Andreas Haahr Larsen et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

A Global Ramachandran Score Identifies Protein Structures with Unlikely Stereochemistry

(2020) Oleg V. Sobolev et al.   STRUCTURE

Interactive Tree Of Life (iTOL) v4: recent updates and new developments

(2019) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

Serine-Threonine Kinases Encoded by Split hipA Homologs Inhibit Tryptophanyl-tRNA Synthetase

(2019) Stine Vang Nielsen et al.   mBio

Serine/Threonine Protein Kinases from Bacteria, Archaea and Eukarya Share a Common Evolutionary Origin Deeply Rooted in the Tree of Life

(2018) Ivan Andreas Stancik et al.   JOURNAL OF MOLECULAR BIOLOGY

Activation of the Stringent Response by Loading of RelA-tRNA Complexes at the Ribosomal A-Site

(2018) Kristoffer Skovbo Winther et al.   MOLECULAR CELL

Toxins, Targets, and Triggers: An Overview of Toxin-Antitoxin Biology

(2018) Alexander Harms et al.   MOLECULAR CELL

The structure of the N-terminal module of the cell wall hydrolase RipA and its role in regulating catalytic activity

(2018) Eva Maria Steiner et al.   PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS

Clustal Omega for making accurate alignments of many protein sequences

(2017) Fabian Sievers et al.   PROTEIN SCIENCE

Chaperone addiction of toxin–antitoxin systems

(2016) Patricia Bordes et al.   Nature Communications

HipBA–promoter structures reveal the basis of heritable multidrug tolerance

(2015) Maria A. Schumacher et al.   NATURE

JPred4: a protein secondary structure prediction server

(2015) Alexey Drozdetskiy et al.   NUCLEIC ACIDS RESEARCH

The bacterial antitoxin HipB establishes a ternary complex with operator DNA and phosphorylated toxin HipA to regulate bacterial persistence

(2014) Yurong Wen et al.   NUCLEIC ACIDS RESEARCH

Molecular Mechanism of Bacterial Persistence by HipA

(2013) Elsa Germain et al.   MOLECULAR CELL

Exploiting structure similarity in refinement: automated NCS and target-structure restraints inBUSTER

(2012) Oliver S. Smart et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Linking Crystallographic Model and Data Quality

(2012) P. A. Karplus et al.   SCIENCE

Role of Unusual P Loop Ejection and Autophosphorylation in HipA-Mediated Persistence and Multidrug Tolerance

(2012) Maria A. Schumacher et al.   Cell Reports

Overview of theCCP4 suite and current developments

(2011) Martyn D. Winn et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

XDS

(2010) Wolfgang Kabsch   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Features and development ofCoot

(2010) P. Emsley et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

New toxins homologous to ParE belonging to three-component toxin-antitoxin systems in Escherichia coli O157:H7

(2010) Régis Hallez et al.   MOLECULAR MICROBIOLOGY

New kinase regulation mechanism found in HipBA: a bacterial persistence switch

(2009) Artem Evdokimov et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Jalview Version 2--a multiple sequence alignment editor and analysis workbench

(2009) A. M. Waterhouse et al.   BIOINFORMATICS

Molecular Mechanisms of HipA-Mediated Multidrug Tolerance and Its Neutralization by HipB

(2009) M. A. Schumacher et al.   SCIENCE