Basic leucine zipper (bZIP) family in Asparagus ( Asparagus officinalis ): genome-wide identification, evolutionary, structure, collinearity, and expression analyses under abiotic stress at the seeding stage

Role of bZIP Transcription Factors in Plant Salt Stress

(2023) Haotian Liu et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The bZIP transcription factor SlAREB1 regulates anthocyanin biosynthesis in response to low temperature in tomato

(2023) Zijian Xu et al.   PLANT JOURNAL

The role of walnut bZIP genes in explant browning

(2023) Hui Wang et al.   BMC GENOMICS

Ginkgo biloba GbbZIP08 transcription factor is involved in the regulation of flavonoid biosynthesis

(2023) Huan Han et al.   JOURNAL OF PLANT PHYSIOLOGY

Heat shock transcription factor (Hsf) gene family in common bean (Phaseolus vulgaris): genome-wide identification, phylogeny, evolutionary expansion and expression analyses at the sprout stage under abiotic stress

(2022) Qi Zhang et al.   BMC PLANT BIOLOGY

Genome-Wide Identification and Analysis of bZIP Gene Family and Resistance of TaABI5 (TabZIP96) under Freezing Stress in Wheat (Triticum aestivum)

(2022) Yi Liang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Karyological and nuclear DNA content variation of the genus Asparagus

(2022) Susann Plath et al.   PLoS One

The bZIP Transcription Factor Family in Adzuki Bean (Vigna Angularis): Genome-Wide Identification, Evolution, and Expression Under Abiotic Stress During the Bud Stage

(2022) Zhengong Yin et al.   Frontiers in Genetics

RNA-Seq Analysis Demonstrates Different Strategies Employed by Tiger Nuts (Cyperus esculentus L.) in Response to Drought Stress

(2022) Zhongsheng Mu et al.   Life-Basel

Genome-wide analysis and expression profile of the bZIP gene family in poplar

(2021) Kai Zhao et al.   BMC PLANT BIOLOGY

Identification and Analysis of bZIP Family Genes in Potato and Their Potential Roles in Stress Responses

(2021) Qi Wang et al.   Frontiers in Plant Science

Transcription Factors Interact with ABA through Gene Expression and Signaling Pathways to Mitigate Drought and Salinity Stress

(2021) Quaid Hussain et al.   Biomolecules

The Soybean bZIP Transcription Factor Gene GmbZIP2 Confers Drought and Salt Resistances in Transgenic Plants

(2020) Yan Yang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Characterization of the bZIP Transcription Factor Family in Pepper (Capsicum annuum L.): CabZIP25 Positively Modulates the Salt Tolerance

(2020) Wen-Xian Gai et al.   Frontiers in Plant Science

Genome-Wide Identification, Evolutionary Patterns, and Expression Analysis of bZIP Gene Family in Olive (Olea europaea L.)

(2020) Siyu Rong et al.   Genes

Genome-wide analysis of the bZIP gene family in Chinese jujube (Ziziphus jujuba Mill.)

(2020) Yao Zhang et al.   BMC GENOMICS

A Soybean bZIP Transcription Factor GmbZIP19 Confers Multiple Biotic and Abiotic Stress Responses in Plant

(2020) Qing He et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

TBtools: An Integrative Toolkit Developed for Interactive Analyses of Big Biological Data

(2020) Chengjie Chen et al.   Molecular Plant

The complete mitochondrial genome of Asparagus officinalis L

(2020) Wentao Sheng   Mitochondrial DNA Part B-Resources

The bZIP Transcription Factor GmbZIP15 Negatively Regulates Salt- and Drought-Stress Responses in Soybean

(2020) Man Zhang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Insight into the bZIP Gene Family in Solanum tuberosum: Genome and Transcriptome Analysis to Understand the Roles of Gene Diversification in Spatiotemporal Gene Expression and Function

(2020) Venura Herath et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Redox‐sensitive bZIP 68 plays a role in balancing stress tolerance with growth in Arabidopsis

(2019) Yimin Li et al.   PLANT JOURNAL

Transcriptome analysis of Asparagus officinalis reveals genes involved in the biosynthesis of rutin and protodioscin

(2019) Tae Gyu Yi et al.   PLoS One

Cytogenetic and genomic organization analyses of chloroplast DNA invasions in the nuclear genome of Asparagus officinalis L. provides signatures of evolutionary complexity and informativity in sex chromosome evolution

(2019) Shu-Fen Li et al.   BMC PLANT BIOLOGY

Transcription Factors Associated with Abiotic and Biotic Stress Tolerance and Their Potential for Crops Improvement

(2019) Baillo et al.   Genes

Genome- and Transcriptome-Wide Characterization of bZIP Gene Family Identifies Potential Members Involved in Abiotic Stress Response and Anthocyanin Biosynthesis in Radish (Raphanus sativus L.)

(2019) Lianxue Fan et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Evolutionary and expression analyses of soybean basic Leucine zipper transcription factor family

(2018) Man Zhang et al.   BMC GENOMICS

The Arabidopsis bZIP transcription factor family — an update

(2018) Wolfgang Dröge-Laser et al.   CURRENT OPINION IN PLANT BIOLOGY

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

Regulating the Regulators: The Control of Transcription Factors in Plant Defense Signaling

(2018) Danny Ng et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

The OsABF1 transcription factor improves drought tolerance by activating the transcription of COR413-TM1 in rice

(2017) Chunyu Zhang et al.   JOURNAL OF EXPERIMENTAL BOTANY

The Arabidopsis bZIP11 transcription factor links low-energy signalling to auxin-mediated control of primary root growth

(2017) Christoph Weiste et al.   PLoS Genetics

InterPro in 2017—beyond protein family and domain annotations

(2016) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

Genome-wide systematic characterization of the bZIP transcriptional factor family in tomato (Solanum lycopersicum L.)

(2015) Dayong Li et al.   BMC GENOMICS

HMMER web server: 2015 update

(2015) Robert D. Finn et al.   NUCLEIC ACIDS RESEARCH

A novel strategy to produce sweeter tomato fruits with high sugar contents by fruit-specific expression of a single bZIP transcription factor gene

(2015) G. H. M. Sagor et al.   PLANT BIOTECHNOLOGY JOURNAL

Crosstalk between Two bZIP Signaling Pathways Orchestrates Salt-Induced Metabolic Reprogramming in Arabidopsis Roots

(2015) Laura Hartmann et al.   PLANT CELL

GSDS 2.0: an upgraded gene feature visualization server

(2014) Bo Hu et al.   BIOINFORMATICS

Genome-wide analysis and expression profile of the bZIP transcription factor gene family in grapevine (Vitis vinifera)

(2014) Jinyi Liu et al.   BMC GENOMICS

SMART: recent updates, new developments and status in 2015

(2014) Ivica Letunic et al.   NUCLEIC ACIDS RESEARCH

A Genome-Scale Resource for the Functional Characterization of Arabidopsis Transcription Factors

(2014) Jose L. Pruneda-Paz et al.   Cell Reports

MCScanX-transposed: detecting transposed gene duplications based on multiple colinearity scans

(2013) Yupeng Wang et al.   BIOINFORMATICS

TFinDit: transcription factor-DNA interaction data depository

(2012) Daniel Turner et al.   BMC BIOINFORMATICS

Genome-Wide Analysis of bZIP-Encoding Genes in Maize

(2012) K. Wei et al.   DNA RESEARCH

Deregulation of Sucrose-Controlled Translation of a bZIP-Type Transcription Factor Results in Sucrose Accumulation in Leaves

(2012) Sunil Kumar Thalor et al.   PLoS One

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

(2011) Bo Li et al.   BMC BIOINFORMATICS

Heterodimers of theArabidopsisTranscription Factors bZIP1 and bZIP53 Reprogram Amino Acid Metabolism during Low Energy Stress

(2011) Katrin Dietrich et al.   PLANT CELL

The bZIP Transcription Factor PERIANTHIA: A Multifunctional Hub for Meristem Control

(2011) Annette T. Maier et al.   Frontiers in Plant Science

Mechanisms of transcription factor selectivity

(2010) Yongping Pan et al.   TRENDS IN GENETICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

PlnTFDB: updated content and new features of the plant transcription factor database

(2009) Paulino Pérez-Rodríguez et al.   NUCLEIC ACIDS RESEARCH

MEME SUITE: tools for motif discovery and searching

(2009) T. L. Bailey et al.   NUCLEIC ACIDS RESEARCH

Identification and characterization of bZIP-type transcription factors involved in carrot (Daucus carotaL.) somatic embryogenesis

(2009) Yucheng Guan et al.   PLANT JOURNAL

Soybean GmbZIP44, GmbZIP62 and GmbZIP78 genes function as negative regulator of ABA signaling and confer salt and freezing tolerance in transgenic Arabidopsis

(2008) Yong Liao et al.   PLANTA

Post-translational regulation of plant bZIP factors

(2008) Katia Schütze et al.   TRENDS IN PLANT SCIENCE