Proteomic analysis of peripheral nerve myelin during murine aging

New hallmarks of ageing: a 2022 Copenhagen ageing meeting summary

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Deep proteome profiling reveals signatures of age and sex differences in paw skin and sciatic nerve of naïve mice

(2022) Feng Xian et al.   eLife

The injured sciatic nerve atlas (iSNAT), insights into the cellular and molecular basis of neural tissue degeneration and regeneration

(2022) Xiao-Feng Zhao et al.   eLife

Review: Myelin clearance is critical for regeneration after peripheral nerve injury

(2022) YiMing Yuan et al.   Frontiers in Neurology

Age-related loss of axonal regeneration is reflected by the level of local translation

(2021) Susan van Erp et al.   EXPERIMENTAL NEUROLOGY

Failures of nerve regeneration caused by aging or chronic denervation are rescued by restoring Schwann cell c-Jun

(2021) Laura J Wagstaff et al.   eLife

Transcriptional profiling of mouse peripheral nerves to the single-cell level to build a sciatic nerve ATlas (SNAT)

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The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences

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Proteome profile of peripheral myelin in healthy mice and in a neuropathy model

(2020) Sophie B Siems et al.   eLife

Repair Schwann cell update: Adaptive reprogramming, EMT, and stemness in regenerating nerves

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COL4A1 Mutations Cause Neuromuscular Disease with Tissue-Specific Mechanistic Heterogeneity

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A predominantly glial origin of axonal ribosomes after nerve injury

(2018) Kerstin Müller et al.   GLIA

Macrophage Depletion Ameliorates Peripheral Neuropathy in Aging Mice

(2018) Xidi Yuan et al.   JOURNAL OF NEUROSCIENCE

Quantifying compartment‐associated variations of protein abundance in proteomics data

(2018) Luca Parca et al.   Molecular Systems Biology

Identification of long-lived synaptic proteins by proteomic analysis of synaptosome protein turnover

(2018) Seok Heo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Inflammaging impairs peripheral nerve maintenance and regeneration

(2018) Robert Büttner et al.   AGING CELL

Merlin controls the repair capacity of Schwann cells after injury by regulating Hippo/YAP activity

(2017) Thomas Mindos et al.   JOURNAL OF CELL BIOLOGY

Neutrophils Are Critical for Myelin Removal in a Peripheral Nerve Injury Model of Wallerian Degeneration

(2017) Jane A. Lindborg et al.   JOURNAL OF NEUROSCIENCE

Schwann cells use TAM receptor-mediated phagocytosis in addition to autophagy to clear myelin in a mouse model of nerve injury

(2017) Amanda Brosius Lutz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

The importance of nerve microenvironment for schwannoma development

(2016) Alexander Schulz et al.   ACTA NEUROPATHOLOGICA

Towards a functional pathology of hereditary neuropathies

(2016) Joachim Weis et al.   ACTA NEUROPATHOLOGICA

Complex heatmaps reveal patterns and correlations in multidimensional genomic data

(2016) Zuguang Gu et al.   BIOINFORMATICS

A Ribosomal Perspective on Proteostasis and Aging

(2016) Kristan K. Steffen et al.   Cell Metabolism

Study of Autophagy and Microangiopathy in Sural Nerves of Patients with Chronic Idiopathic Axonal Polyneuropathy

(2016) Kristin Samuelsson et al.   PLoS One

Schwann cell autophagy, myelinophagy, initiates myelin clearance from injured nerves

(2015) Jose A. Gomez-Sanchez et al.   JOURNAL OF CELL BIOLOGY

limma powers differential expression analyses for RNA-sequencing and microarray studies

(2015) Matthew E. Ritchie et al.   NUCLEIC ACIDS RESEARCH

Schwann Cell Myelination

(2015) James L. Salzer   Cold Spring Harbor Perspectives in Biology

Myelination of the Nervous System: Mechanisms and Functions

(2014) Klaus-Armin Nave et al.   Annual Review of Cell and Developmental Biology

Dynamics of Oligodendrocyte Generation and Myelination in the Human Brain

(2014) Maggie S.Y. Yeung et al.   CELL

Contrasting the Glial Response to Axon Injury in the Central and Peripheral Nervous Systems

(2014) Amanda Brosius Lutz et al.   DEVELOPMENTAL CELL

Diminished Schwann Cell Repair Responses Underlie Age-Associated Impaired Axonal Regeneration

(2014) Michio W. Painter et al.   NEURON

Type IV collagen is an activating ligand for the adhesion G protein-coupled receptor GPR126

(2014) K. J. Paavola et al.   Science Signaling

Identification of Long-Lived Proteins Reveals Exceptional Stability of Essential Cellular Structures

(2013) Brandon H. Toyama et al.   CELL

Fiji: an open-source platform for biological-image analysis

(2012) Johannes Schindelin et al.   NATURE METHODS

MSnbase-an R/Bioconductor package for isobaric tagged mass spectrometry data visualization, processing and quantitation

(2011) Laurent Gatto et al.   BIOINFORMATICS

VennDiagram: a package for the generation of highly-customizable Venn and Euler diagrams in R

(2011) Hanbo Chen et al.   BMC BIOINFORMATICS

Myelin down-regulates myelin phagocytosis by microglia and macrophages through interactions between CD47 on myelin and SIRPα (signal regulatory protein-α) on phagocytes

(2011) Miri Gitik et al.   Journal of Neuroinflammation

Wallerian degeneration: the innate-immune response to traumatic nerve injury

(2011) Shlomo Rotshenker   Journal of Neuroinflammation

Quantitative and Integrative Proteome Analysis of Peripheral Nerve Myelin Identifies Novel Myelin Proteins and Candidate Neuropathy Loci

(2011) J. Patzig et al.   JOURNAL OF NEUROSCIENCE

Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment

(2011) Jürgen Cox et al.   JOURNAL OF PROTEOME RESEARCH

Morphometric analysis of human sciatic nerve perineurial collagen type IV content

(2011) Sladjana Ugrenović et al.   MICROSCOPY RESEARCH AND TECHNIQUE

Influence of aging on peripheral nerve function and regeneration

(2010) Enrique Verdú et al.   JOURNAL OF THE PERIPHERAL NERVOUS SYSTEM

Molecular architecture of myelinated peripheral nerves is supported by calorie restriction with aging

(2009) Sunitha Rangaraju et al.   AGING CELL

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

(2009) Da Wei Huang et al.   Nature Protocols

Mapping identifiers for the integration of genomic datasets with the R/Bioconductor package biomaRt

(2009) Steffen Durinck et al.   Nature Protocols

A unified approach to false discovery rate estimation

(2008) Korbinian Strimmer   BMC BIOINFORMATICS

The neuroprotective properties of calorie restriction, the ketogenic diet, and ketone bodies

(2008) Marwan Maalouf et al.   BRAIN RESEARCH REVIEWS

Regulation of Schwann cell function by the extracellular matrix

(2008) Michael A. Chernousov et al.   GLIA

Schwann Cell to Axon Transfer of Ribosomes: Toward a Novel Understanding of the Role of Glia in the Nervous System

(2008) F. A. Court et al.   JOURNAL OF NEUROSCIENCE

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

(2008) Jürgen Cox et al.   NATURE BIOTECHNOLOGY