Predictor bias in genomic and phenomic selection

A comparison of methods for training population optimization in genomic selection

(2023) Javier Fernández-González et al.   THEORETICAL AND APPLIED GENETICS

Unraveling the potential of phenomic selection within and among diverse breeding material of maize (Zea mays L.)

(2022) Thea Mi Weiß et al.   G3-Genes Genomes Genetics

Deep learning: as the new frontier in high-throughput plant phenotyping

(2022) Sunny Arya et al.   EUPHYTICA

Genetics of the Inverse Relationship between Grain Yield and Grain Protein Content in Common Wheat

(2022) Manuel Geyer et al.   Plants-Basel

Genetic trends in CIMMYT’s tropical maize breeding pipelines

(2022) Boddupalli M. Prasanna et al.   Scientific Reports

Use of multiple ‘omics techniques to accelerate the breeding of abiotic stress tolerant crops

(2022) Mark C. Derbyshire et al.   Current Plant Biology

Merging Genomics and Transcriptomics for Predicting Fusarium Head Blight Resistance in Wheat

(2021) Sebastian Michel et al.   Genes

Genetic architecture of phenotypic indices for simultaneous improvement of protein content and grain yield in triticale (× triticosecale )

(2021) Jan E. Neuweiler et al.   PLANT BREEDING

An Overview of Key Factors Affecting Genomic Selection for Wheat Quality Traits

(2021) Ivana Plavšin et al.   Plants-Basel

Evaluating the performance of the CCCI-CNI index for estimating N status of winter wheat

(2021) M. Palka et al.   EUROPEAN JOURNAL OF AGRONOMY

The performance of phenomic selection depends on the genetic architecture of the target trait

(2021) Xintian Zhu et al.   THEORETICAL AND APPLIED GENETICS

Genetic architecture underpinning yield component traits in wheat

(2020) Shuanghe Cao et al.   THEORETICAL AND APPLIED GENETICS

Review: Cost-Effective Unmanned Aerial Vehicle (UAV) Platform for Field Plant Breeding Application

(2020) GyuJin Jang et al.   Remote Sensing

Integration of genotypic, hyperspectral, and phenotypic data to improve biomass yield prediction in hybrid rye

(2020) Rodrigo José Galán et al.   THEORETICAL AND APPLIED GENETICS

Hyperspectral Reflectance-Derived Relationship Matrices for Genomic Prediction of Grain Yield in Wheat

(2019) Margaret R. Krause et al.   G3-Genes Genomes Genetics

Simultaneous selection for grain yield and protein content in genomics-assisted wheat breeding

(2019) Sebastian Michel et al.   THEORETICAL AND APPLIED GENETICS

Bread wheat: a role model for plant domestication and breeding

(2019) Eduardo Venske et al.   HEREDITAS

Deep Kernel for Genomic and Near Infrared Predictions in Multi-Environment Breeding Trials

(2019) Jaime Cuevas et al.   G3-Genes Genomes Genetics

Beyond Genomic Prediction: Combining Different Types ofomicsData Can Improve Prediction of Hybrid Performance in Maize

(2018) Tobias A. Schrag et al.   GENETICS

An empirical model for prediction of wheat yield, using time-integrated Landsat NDVI

(2018) Y.R. Lai et al.   International Journal of Applied Earth Observation and Geoinformation

Higher grain yield and higher grain protein deviation underline the potential of hybrid wheat for a sustainable agriculture

(2018) Patrick Thorwarth et al.   PLANT BREEDING

Simultaneous improvement of grain yield and protein content in durum wheat by different phenotypic indices and genomic selection

(2018) M. Rapp et al.   THEORETICAL AND APPLIED GENETICS

Phenotypic and genetic analysis of spike and kernel characteristics in wheat reveals long-term genetic trends of grain yield components

(2018) Tobias Würschum et al.   THEORETICAL AND APPLIED GENETICS

Optimising Genomic Selection in Wheat: Effect of Marker Density, Population Size and Population Structure on Prediction Accuracy

(2018) Adam Norman et al.   G3-Genes Genomes Genetics

Beyond Genomic Prediction: Combining Different Types ofomicsData Can Improve Prediction of Hybrid Performance in Maize

(2018) Tobias A. Schrag et al.   GENETICS

Correcting for spatial heterogeneity in plant breeding experiments with P-splines

(2018) María Xosé Rodríguez-Álvarez et al.   Spatial Statistics

A reductionist approach to dissecting grain weight and yield in wheat

(2018) Jemima Brinton et al.   Journal of Integrative Plant Biology

Phenomic Selection Is a Low-Cost and High-Throughput Method Based on Indirect Predictions: Proof of Concept on Wheat and Poplar

(2018) Renaud Rincent et al.   G3-Genes Genomes Genetics

Genomic prediction unifies animal and plant breeding programs to form platforms for biological discovery

(2017) John M Hickey et al.   NATURE GENETICS

Predicting grain yield using canopy hyperspectral reflectance in wheat breeding data

(2017) Osval A. Montesinos-López et al.   Plant Methods

Molecular mapping and genomics of soybean seed protein: a review and perspective for the future

(2017) Gunvant Patil et al.   THEORETICAL AND APPLIED GENETICS

Genomic Selection in Plant Breeding: Methods, Models, and Perspectives

(2017) José Crossa et al.   TRENDS IN PLANT SCIENCE

Unmanned Aerial Vehicle Remote Sensing for Field-Based Crop Phenotyping: Current Status and Perspectives

(2017) Guijun Yang et al.   Frontiers in Plant Science

Changes in genetic selection differentials and generation intervals in US Holstein dairy cattle as a result of genomic selection

(2016) Adriana García-Ruiz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Genetic control of protein content and sedimentation volume in European winter wheat cultivars

(2016) Tobias Würschum et al.   THEORETICAL AND APPLIED GENETICS

Canopy Temperature and Vegetation Indices from High-Throughput Phenotyping Improve Accuracy of Pedigree and Genomic Selection for Grain Yield in Wheat

(2016) Jessica Rutkoski et al.   G3-Genes Genomes Genetics

Genome-Assisted Prediction of Quantitative Traits Using the R Package sommer

(2016) Giovanny Covarrubias-Pazaran   PLoS One

Refining breeding methods for organic and low-input agriculture: analysis of an international winter wheat ring test

(2014) Almuth Elise Muellner et al.   EUPHYTICA

MissForest--non-parametric missing value imputation for mixed-type data

(2011) D. J. Stekhoven et al.   BIOINFORMATICS

An integrated study of grain development of wheat (cv. Hereward)

(2011) Peter R. Shewry et al.   JOURNAL OF CEREAL SCIENCE

Phenomics – technologies to relieve the phenotyping bottleneck

(2011) Robert T. Furbank et al.   TRENDS IN PLANT SCIENCE

A relationship matrix including full pedigree and genomic information

(2009) A. Legarra et al.   JOURNAL OF DAIRY SCIENCE

Breeding for organic agriculture: the example of winter wheat in Austria

(2008) Franziska Löschenberger et al.   EUPHYTICA

Efficient Methods to Compute Genomic Predictions

(2008) P.M. VanRaden   JOURNAL OF DAIRY SCIENCE