Widespread sympatry in a species-rich clade of marine fishes (Carangoidei)

Prolonged morphological expansion of spiny-rayed fishes following the end-Cretaceous

(2022) Ava Ghezelayagh et al.   Nature Ecology & Evolution

Global phylogeography of hyperdiverse lanternfishes indicates sympatric speciation in the deep sea

(2022) Jennifer J. Freer et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

The role of divergent ecological adaptation during allopatric speciation in vertebrates

(2022) Sean A. S. Anderson et al.   SCIENCE

The Phylogeny of Carangiform Fishes: Morphological and Genomic Investigations of a New Fish Clade

(2020) Matthew G. Girard et al.   COPEIA

Geography of speciation affects rate of trait divergence in haemulid fishes

(2019) José J. Tavera et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Adapterama I: universal stubs and primers for 384 unique dual-indexed or 147,456 combinatorially-indexed Illumina libraries (iTru & iNext)

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Estimating Improved Partitioning Schemes for Ultraconserved Elements

(2018) Victor A Tagliacollo et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogenetics and geography of speciation in New World Halichoeres wrasses

(2018) Peter C. Wainwright et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data

(2018) Lily C. Hughes et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Explosive diversification of marine fishes at the Cretaceous–Palaeogene boundary

(2018) Michael E. Alfaro et al.   Nature Ecology & Evolution

Colour pattern divergence in reef fish species is rapid and driven by both range overlap and symmetry

(2018) Christopher R. Hemingson et al.   ECOLOGY LETTERS

Multi-gene phylogeny of jacks and pompanos (Carangidae), including placement of monotypic vadigo Campogramma glaycos

(2017) M. Damerau et al.   JOURNAL OF FISH BIOLOGY

Phylogenomic analysis of carangimorph fishes reveals flatfish asymmetry arose in a blink of the evolutionary eye

(2016) Richard C. Harrington et al.   BMC EVOLUTIONARY BIOLOGY

Evolutionary processes underlying latitudinal differences in reef fish biodiversity

(2016) Alexandre C. Siqueira et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

The geography of speciation in coral reef fishes: the relative importance of biogeographical barriers in separating sister-species

(2016) Jennifer R. Hodge et al.   JOURNAL OF BIOGEOGRAPHY

Tempo and mode of speciation in Holacanthus angelfishes based on RADseq markers

(2016) Juliette Tariel et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Non-reef environments impact the diversification of extant jacks, remoras and allies (Carangoidei, Percomorpha)

(2016) Bruno Frédérich et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Biogeography of Adaptive Radiations and the Geographic Overlap of Sister Species

(2015) Mikael Pontarp et al.   AMERICAN NATURALIST

ASTRAL-II: coalescent-based species tree estimation with many hundreds of taxa and thousands of genes

(2015) Siavash Mirarab et al.   BIOINFORMATICS

PHYLUCE is a software package for the analysis of conserved genomic loci

(2015) Brant C. Faircloth   BIOINFORMATICS

Phylogenetic insights into the history and diversification of fishes on reefs

(2015) S. A. Price et al.   CORAL REEFS

On the relationship between species age and geographical range in reef fishes: are widespread species older than they seem?

(2015) Jennifer Hodge et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Seafarers or castaways: ecological traits associated with rafting dispersal in tropical reef fishes

(2015) Osmar J. Luiz et al.   JOURNAL OF BIOGEOGRAPHY

First multilocus and densely sampled timetree of trevallies, pompanos and allies (Carangoidei, Percomorpha) suggests a Cretaceous origin and Eocene radiation of a major clade of piscivores

(2015) Francesco Santini et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Rapid diversification and secondary sympatry in Australo-Pacific kingfishers (Aves: Alcedinidae: Todiramphus)

(2015) M. J. Andersen et al.   Royal Society Open Science

Temporal evolution of coral reef fishes: global patterns and disparity in isolated locations

(2014) Jennifer R. Hodge et al.   JOURNAL OF BIOGEOGRAPHY

Permanent aggregations of a pelagic predator at shallow seamounts

(2014) Jorge Fontes et al.   MARINE BIOLOGY

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

The geography and ecology of plant speciation: range overlap and niche divergence in sister species

(2014) B. L. Anacker et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Dispersal and the transition to sympatry in vertebrates

(2014) A. L. Pigot et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Historical factors that have shaped the evolution of tropical reef fishes: a review of phylogenies, biogeography, and remaining questions

(2014) Peter F. Cowman   Frontiers in Genetics

After continents divide: comparative phylogeography of reef fishes from the Red Sea and Indian Ocean

(2013) Joseph D. DiBattista et al.   JOURNAL OF BIOGEOGRAPHY

Evolution of sympatric species: a case study of the coral reef fish genusPomacanthus(Pomacanthidae)

(2013) Jennifer R. Hodge et al.   JOURNAL OF BIOGEOGRAPHY

Ultrafast Approximation for Phylogenetic Bootstrap

(2013) B. Q. Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

Phylogeny and tempo of diversification in the superradiation of spiny-rayed fishes

(2013) T. J. Near et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Addressing Gene Tree Discordance and Non-Stationarity to Resolve a Multi-Locus Phylogeny of the Flatfishes (Teleostei: Pleuronectiformes)

(2013) Ricardo Betancur-R. et al.   SYSTEMATIC BIOLOGY

Bayesian Analysis of Biogeography when the Number of Areas is Large

(2013) Michael J. Landis et al.   SYSTEMATIC BIOLOGY

The origins of tropical marine biodiversity

(2013) Brian W. Bowen et al.   TRENDS IN ECOLOGY & EVOLUTION

Patterns and processes in the evolutionary history of parrotfishes (Family Labridae)

(2012) John. H. Choat et al.   BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY

Species interactions constrain geographic range expansion over evolutionary time

(2012) Alex L. Pigot et al.   ECOLOGY LETTERS

ELEVATED RATES OF MORPHOLOGICAL AND FUNCTIONAL DIVERSIFICATION IN REEF-DWELLING HAEMULID FISHES

(2012) Samantha A. Price et al.   EVOLUTION

The historical biogeography of coral reef fishes: global patterns of origination and dispersal

(2012) Peter F. Cowman et al.   JOURNAL OF BIOGEOGRAPHY

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Speciation in little: the role of range and body size in the diversification of Malagasy mantellid frogs

(2011) Katharina C Wollenberg et al.   BMC EVOLUTIONARY BIOLOGY

High connectivity among habitats precludes the relationship between dispersal and range size in tropical reef fishes

(2011) Camilo Mora et al.   ECOGRAPHY

Speciation in tropical seas: Allopatry followed by range change

(2011) Brice Quenouille et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

The role of peripheral endemism in species diversification: Evidence from the coral reef fish genus Anampses (Family: Labridae)

(2011) Jennifer R. Hodge et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Ecological traits influencing range expansion across large oceanic dispersal barriers: insights from tropical Atlantic reef fishes

(2011) O. J. Luiz et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

phytools: an R package for phylogenetic comparative biology (and other things)

(2011) Liam J. Revell   Methods in Ecology and Evolution

Character Displacement and the Origins of Diversity

(2010) David W. Pfennig et al.   AMERICAN NATURALIST

Selectivity in Mammalian Extinction Risk and Threat Types: a New Measure of Phylogenetic Signal Strength in Binary Traits

(2010) SUSANNE A. FRITZ et al.   CONSERVATION BIOLOGY

Trophic level scales positively with body size in fishes

(2010) Tamara N. Romanuk et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Speciation along a depth gradient in a marine adaptive radiation

(2010) Travis Ingram   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

RAPID SYMPATRY EXPLAINS GREATER COLOR PATTERN DIVERGENCE IN HIGH LATITUDE BIRDS

(2009) Paul R. Martin et al.   EVOLUTION

Multi-scale patterns of habitat use in a highly mobile reef fish, the white trevally Pseudocaranx dentex, and their implications for marine reserve design

(2009) P Afonso et al.   MARINE ECOLOGY PROGRESS SERIES

Population genetics, larval dispersal, and connectivity in marine systems

(2009) K Weersing et al.   MARINE ECOLOGY PROGRESS SERIES

Sympatric Speciation in Birds Is Rare: Insights from Range Data and Simulations

(2008) Albert B. Phillimore et al.   AMERICAN NATURALIST

The Great American Schism: Divergence of Marine Organisms After the Rise of the Central American Isthmus

(2008) H.A. Lessios   Annual Review of Ecology Evolution and Systematics

Speciation in coral-reef fishes

(2008) L. A. Rocha et al.   JOURNAL OF FISH BIOLOGY

Historical biogeography and speciation in the reef fish genus Haemulon (Teleostei: Haemulidae)

(2008) Luiz A. Rocha et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

Sympatric, parapatric or allopatric: the most important way to classify speciation?

(2008) R. K Butlin et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES