Comparative transcriptomic analyses ofZymoseptoria triticistrains show complex lifestyle transitions and intraspecific variability in transcription profiles

Zymoseptoria tritici: A major threat to wheat production, integrated approaches to control

(2015) Stefano F.F. Torriani et al.   FUNGAL GENETICS AND BIOLOGY

Is Zymoseptoria tritici a hemibiotroph?

(2015) Andrea Sánchez-Vallet et al.   FUNGAL GENETICS AND BIOLOGY

Genetics of resistance to Zymoseptoria tritici and applications to wheat breeding

(2015) James K.M. Brown et al.   FUNGAL GENETICS AND BIOLOGY

Effector discovery in the fungal wheat pathogenZymoseptoria tritici

(2015) Amir Mirzadi Gohari et al.   MOLECULAR PLANT PATHOLOGY

Emergence and early evolution of fungicide resistance in North American populations ofZymoseptoria tritici

(2015) L. K. Estep et al.   PLANT PATHOLOGY

Transcriptome and Metabolite Profiling of the Infection Cycle ofZymoseptoria triticion Wheat Reveals a Biphasic Interaction with Plant Immunity Involving Differential Pathogen Chromosomal Contributions and a Variation on the Hemibiotrophic Lifestyle Definition

(2015) Jason J. Rudd et al.   PLANT PHYSIOLOGY

Rapidly Evolving Genes Are Key Players in Host Specialization and Virulence of the Fungal Wheat Pathogen Zymoseptoria tritici (Mycosphaerella graminicola)

(2015) Stephan Poppe et al.   PLoS Pathogens

HTSeq--a Python framework to work with high-throughput sequencing data

(2014) S. Anders et al.   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Expression Profiling of the Wheat Pathogen Zymoseptoria tritici Reveals Genomic Patterns of Transcription and Host-Specific Regulatory Programs

(2014) Ronny Kellner et al.   Genome Biology and Evolution

Measuring Quantitative Virulence in the Wheat Pathogen Zymoseptoria tritici Using High-Throughput Automated Image Analysis

(2014) Ethan L. Stewart et al.   PHYTOPATHOLOGY

The wheat–Septoria conflict: a new front opening up?

(2014) Aoife O’Driscoll et al.   TRENDS IN PLANT SCIENCE

GPR34 as a lysophosphatidylserine receptor

(2013) K. Makide et al.   JOURNAL OF BIOCHEMISTRY

Coevolution and Life Cycle Specialization of Plant Cell Wall Degrading Enzymes in a Hemibiotrophic Pathogen

(2013) Patrick C. Brunner et al.   MOLECULAR BIOLOGY AND EVOLUTION

Mycosphaerella graminicolaLysM Effector-Mediated Stealth Pathogenesis Subverts Recognition Through Both CERK1 and CEBiP Homologues in Wheat

(2013) Wing-Sham Lee et al.   MOLECULAR PLANT-MICROBE INTERACTIONS

Breakage-fusion-bridge Cycles and Large Insertions Contribute to the Rapid Evolution of Accessory Chromosomes in a Fungal Pathogen

(2013) Daniel Croll et al.   PLoS Genetics

Lifestyle transitions in plant pathogenic Colletotrichum fungi deciphered by genome and transcriptome analyses

(2012) Richard J O'Connell et al.   NATURE GENETICS

Update on mechanisms of azole resistance inMycosphaerella graminicolaand implications for future control

(2012) Hans J Cools et al.   PEST MANAGEMENT SCIENCE

Comparative Transcriptome Profiling of the Early Response to Magnaporthe oryzae in Durable Resistant vs Susceptible Rice (Oryza sativa L.) Genotypes

(2012) Paolo Bagnaresi et al.   PLoS One

Defining the Predicted Protein Secretome of the Fungal Wheat Leaf Pathogen Mycosphaerella graminicola

(2012) Alexandre Morais do Amaral et al.   PLoS One

Evidence for Extensive Recent Intron Transposition in Closely Related Fungi

(2011) Stefano F.F. Torriani et al.   CURRENT BIOLOGY

Analysis of Two in Planta Expressed LysM Effector Homologs from the Fungus Mycosphaerella graminicola Reveals Novel Functional Properties and Varying Contributions to Virulence on Wheat

(2011) R. Marshall et al.   PLANT PHYSIOLOGY

Finished Genome of the Fungal Wheat Pathogen Mycosphaerella graminicola Reveals Dispensome Structure, Chromosome Plasticity, and Stealth Pathogenesis

(2011) Stephen B. Goodwin et al.   PLoS Genetics

Tomato Cf resistance proteins mediate recognition of cognate homologous effectors from fungi pathogenic on dicots and monocots

(2010) I. Stergiopoulos et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

TopHat: discovering splice junctions with RNA-Seq

(2009) Cole Trapnell et al.   BIOINFORMATICS

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

(2009) M. D. Robinson et al.   BIOINFORMATICS

Identification and characterisation of Mycosphaerella graminicola secreted or surface-associated proteins with variable intragenic coding repeats

(2009) Jason J. Rudd et al.   FUNGAL GENETICS AND BIOLOGY

Surface lipids and plant defenses

(2009) José J. Reina-Pinto et al.   PLANT PHYSIOLOGY AND BIOCHEMISTRY

The heat shock proteins: Their roles as multi-component machines for protein folding

(2009) Barry Panaretou et al.   Fungal Biology Reviews

Halogenation Strategies In Natural Product Biosynthesis

(2008) Christopher S. Neumann et al.   CHEMISTRY & BIOLOGY

Evolution of the CYP51 gene in Mycosphaerella graminicola: evidence for intragenic recombination and selective replacement

(2008) P. C. BRUNNER et al.   MOLECULAR PLANT PATHOLOGY

QoI resistance emerged independently at least 4 times in European populations ofMycosphaerella graminicola

(2008) Stefano FF Torriani et al.   PEST MANAGEMENT SCIENCE

Building lipid barriers: biosynthesis of cutin and suberin

(2008) Mike Pollard et al.   TRENDS IN PLANT SCIENCE