Stochastic organelle genome segregation through Arabidopsis development and reproduction

Avoiding misleading estimates using mtDNA heteroplasmy statistics to study bottleneck size and selection

(2023) Konstantinos Giannakis et al.   G3-Genes Genomes Genetics

Altered collective mitochondrial dynamics in the Arabidopsis msh1 mutant compromising organelle DNA maintenance

(2022) Joanna M Chustecki et al.   JOURNAL OF EXPERIMENTAL BOTANY

Sorting of mitochondrial and plastid heteroplasmy in Arabidopsis is extremely rapid and depends on MSH1 activity

(2022) Amanda K. Broz et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Evolutionary inference across eukaryotes identifies universal features shaping organelle gene retention

(2022) Konstantinos Giannakis et al.   Cell Systems

Phylodynamics for cell biologists

(2021) T. Stadler et al.   SCIENCE

Avoiding organelle mutational meltdown across eukaryotes with or without a germline bottleneck

(2021) David M. Edwards et al.   PLOS BIOLOGY

Network analysis of Arabidopsis mitochondrial dynamics reveals a resolved tradeoff between physical distribution and social connectivity

(2021) Joanna M. Chustecki et al.   Cell Systems

Nuclear‐cytoplasmic balance: whole genome duplications induce elevated organellar genome copy number

(2021) Matheus Fernandes Gyorfy et al.   PLANT JOURNAL

MSH1is required for maintenance of the low mutation rates in plant mitochondrial and plastid genomes

(2020) Zhiqiang Wu et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Disentangling Complex Inheritance Patterns of Plant Organellar Genomes: An Example From Carrot

(2020) Jennifer R Mandel et al.   JOURNAL OF HEREDITY

Gene Loss and Evolution of the Plastome

(2020) Tapan Kumar Mohanta et al.   Genes

Varied Mechanisms and Models for the Varying Mitochondrial Bottleneck

(2019) Iain G. Johnston   Frontiers in Cell and Developmental Biology

Chloroplast nucleoids are highly dynamic in ploidy, number, and structure during angiosperm leaf development

(2019) Stephan Greiner et al.   PLANT JOURNAL

The mitochondrial DNA genetic bottleneck: inheritance and beyond

(2018) Haixin Zhang et al.   Essays in Biochemistry

A Population Phylogenetic View of Mitochondrial Heteroplasmy

(2018) Peter R. Wilton et al.   GENETICS

Changes in mitochondrial DNA levels during early embryogenesis in Torenia fournieri and Arabidopsis thaliana

(2018) Long Gao et al.   PLANT JOURNAL

Large-scale genetic analysis reveals mammalian mtDNA heteroplasmy dynamics and variance increase through lifetimes and generations

(2018) Joerg P. Burgstaller et al.   Nature Communications

Do plants have a segregated germline?

(2018) Robert Lanfear   PLOS BIOLOGY

A Population Phylogenetic View of Mitochondrial Heteroplasmy

(2018) Peter R. Wilton et al.   GENETICS

Tension and Resolution: Dynamic, Evolving Populations of Organelle Genomes within Plant Cells

(2018) Iain G. Johnston   Molecular Plant

Fission and Fusion of Plant Mitochondria, and Genome Maintenance

(2017) Shin-ichi Arimura   PLANT PHYSIOLOGY

Patterns of Stem Cell Divisions Contribute to Plant Longevity

(2016) Agata Burian et al.   CURRENT BIOLOGY

Biparental chloroplast inheritance leads to rescue from cytonuclear incompatibility

(2016) Karen B. Barnard-Kubow et al.   NEW PHYTOLOGIST

Germline replications and somatic mutation accumulation are independent of vegetative life span inArabidopsis

(2016) J. Matthew Watson et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Accurate concentration control of mitochondria and nucleoids

(2016) R. Jajoo et al.   SCIENCE

Why Have Organelles Retained Genomes?

(2016) John F. Allen et al.   Cell Systems

Intra-individual polymorphism in chloroplasts from NGS data: where does it come from and how to handle it?

(2015) N. Scarcelli et al.   Molecular Ecology Resources

The dynamics of mitochondrial DNA heteroplasmy: implications for human health and disease

(2015) James B. Stewart et al.   NATURE REVIEWS GENETICS

Arabidopsis MSH1 mutation alters the epigenome and produces heritable changes in plant growth

(2015) Kamaldeep S. Virdi et al.   Nature Communications

Stochastic modelling, Bayesian inference, and new in vivo measurements elucidate the debated mtDNA bottleneck mechanism

(2015) Iain G Johnston et al.   eLife

Why are most organelle genomes transmitted maternally?

(2014) Stephan Greiner et al.   BIOESSAYS

Genes and Junk in Plant Mitochondria—Repair Mechanisms and Selection

(2014) Alan C. Christensen   Genome Biology and Evolution

mtDNA Segregation in Heteroplasmic Tissues Is Common In Vivo and Modulated by Haplotype Differences and Developmental Stage

(2014) Joerg Patrick Burgstaller et al.   Cell Reports

The plant mitochondrial genome: Dynamics and maintenance

(2013) José M. Gualberto et al.   BIOCHIMIE

Model selection in systems and synthetic biology

(2013) Paul Kirk et al.   CURRENT OPINION IN BIOTECHNOLOGY

Paternal leakage, heteroplasmy, and the evolution of plant mitochondrial genomes

(2013) David E. McCauley   NEW PHYTOLOGIST

Mitochondrial DNA Genetics and the Heteroplasmy Conundrum in Evolution and Disease

(2013) D. C. Wallace et al.   Cold Spring Harbor Perspectives in Biology

RecA-Dependent DNA Repair Results in Increased Heteroplasmy of the Arabidopsis Mitochondrial Genome

(2012) M. Miller-Messmer et al.   PLANT PHYSIOLOGY

Mitochondrial Variability as a Source of Extrinsic Cellular Noise

(2012) Iain G. Johnston et al.   PLoS Computational Biology

The intriguing evolutionary dynamics of plant mitochondrial DNA

(2011) Nicolas Galtier   BMC BIOLOGY

Paternal Leakage and Heteroplasmy of Mitochondrial Genomes in Silene vulgaris: Evidence From Experimental Crosses

(2010) K. E. Bentley et al.   GENETICS

RecA maintains the integrity of chloroplast DNA molecules in Arabidopsis

(2010) Beth A. Rowan et al.   JOURNAL OF EXPERIMENTAL BOTANY

The foundation of extranuclear inheritance: plastid and mitochondrial genetics

(2010) Rudolf Hagemann   MOLECULAR GENETICS AND GENOMICS

Recombination and the maintenance of plant organelle genome stability

(2010) Alexandre Maréchal et al.   NEW PHYTOLOGIST

The Levels of Male Gametic Mitochondrial DNA Are Highly Regulated in Angiosperms with Regard to Mitochondrial Inheritance

(2010) D.-Y. Wang et al.   PLANT CELL

Fewer genes than organelles: extremely low and variable gene copy numbers in mitochondria of somatic plant cells

(2010) Tobias Preuten et al.   PLANT JOURNAL

Diversity of the Arabidopsis Mitochondrial Genome Occurs via Nuclear-Controlled Recombination Activity

(2009) Maria P. Arrieta-Montiel et al.   GENETICS

Heteroplasmy and stoichiometric complexity of plant mitochondrial genomes--though this be madness, yet there's method in't

(2009) M. Woloszynska   JOURNAL OF EXPERIMENTAL BOTANY

The Distribution of Mitochondrial DNA Heteroplasmy Due to Random Genetic Drift

(2008) Passorn Wonnapinij et al.   AMERICAN JOURNAL OF HUMAN GENETICS

The mitochondrial DNA genetic bottleneck results from replication of a subpopulation of genomes

(2008) Timothy Wai et al.   NATURE GENETICS

A reduction of mitochondrial DNA molecules during embryogenesis explains the rapid segregation of genotypes

(2008) Lynsey M Cree et al.   NATURE GENETICS