An automated nanowell-array workflow for quantitative multiplexed single-cell proteomics sample preparation at high sensitivity

Robust and Easy-to-Use One-Pot Workflow for Label-Free Single-Cell Proteomics

(2023) Manuel Matzinger et al.   Analytical Chemistry

Easy and Accessible Workflow for Label-Free Single-Cell Proteomics

(2023) Ximena Sanchez-Avila et al.   JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY

Understanding the effect of carrier proteomes in single cell proteomic studies - key lessons

(2022) Pankaj Dwivedi et al.   Expert Review of Proteomics

A deeper look at carrier proteome effects for single-cell proteomics

(2022) Zilu Ye et al.   Communications Biology

Real-Time Search-Assisted Acquisition on a Tribrid Mass Spectrometer Improves Coverage in Multiplexed Single-Cell Proteomics

(2022) Benjamin Furtwängler et al.   MOLECULAR & CELLULAR PROTEOMICS

Ultra‐high sensitivity mass spectrometry quantifies single‐cell proteome changes upon perturbation

(2022) Andreas‐David Brunner et al.   Molecular Systems Biology

Recent advances in the field of single-cell proteomics

(2022) Valdemaras Petrosius et al.   Translational Oncology

Insights into protein post-translational modification landscapes of individual human cells by trapped ion mobility time-of-flight mass spectrometry

(2022) Benjamin C. Orsburn et al.   Nature Communications

TMTpro-18plex: The Expanded and Complete Set of TMTpro Reagents for Sample Multiplexing

(2021) Jiaming Li et al.   JOURNAL OF PROTEOME RESEARCH

Ultrasensitive NanoLC-MS of Subnanogram Protein Samples Using Second Generation Micropillar Array LC Technology with Orbitrap Exploris 480 and FAIMS PRO

(2021) Karel Stejskal et al.   ANALYTICAL CHEMISTRY

Quantitative single-cell proteomics as a tool to characterize cellular hierarchies

(2021) Erwin M. Schoof et al.   Nature Communications

High-throughput and high-efficiency sample preparation for single-cell proteomics using a nested nanowell chip

(2021) Jongmin Woo et al.   Nature Communications

Full-featured, real-time database searching platform enables fast and accurate multiplexed quantitative proteomics.

(2020) Devin K. Schweppe et al.   JOURNAL OF PROTEOME RESEARCH

A Compact Quadrupole-Orbitrap Mass Spectrometer with FAIMS Interface Improves Proteome Coverage in Short LC Gradients

(2020) Dorte B. Bekker-Jensen et al.   MOLECULAR & CELLULAR PROTEOMICS

Rapid and deep-scale ubiquitylation profiling for biology and translational research

(2020) Namrata D. Udeshi et al.   Nature Communications

Automated Coupling of Nanodroplet Sample Preparation with Liquid Chromatography–Mass Spectrometry for High-Throughput Single-Cell Proteomics

(2020) Sarah M. Williams et al.   ANALYTICAL CHEMISTRY

Improved Sensitivity of Ultralow Flow LC–MS-Based Proteomic Profiling of Limited Samples Using Monolithic Capillary Columns and FAIMS Technology

(2020) Michal Greguš et al.   ANALYTICAL CHEMISTRY

A Unique Family of Neuronal Signaling Proteins Implicated in Oncogenesis and Tumor Suppression

(2019) Markus Hartl et al.   Frontiers in Oncology

Multi-batch TMT reveals false positives, batch effects and missing values

(2019) Alejandro Brenes et al.   MOLECULAR & CELLULAR PROTEOMICS

High-Throughput Single Cell Proteomics Enabled by Multiplex Isobaric Labeling in a Nanodroplet Sample Preparation Platform

(2019) Maowei Dou et al.   ANALYTICAL CHEMISTRY

TMTpro: Design, Synthesis, and Initial Evaluation of a Proline-Based Isobaric 16-Plex Tandem Mass Tag Reagent Set

(2019) Andrew Thompson et al.   ANALYTICAL CHEMISTRY

Nanodroplet processing platform for deep and quantitative proteome profiling of 10–100 mammalian cells

(2018) Ying Zhu et al.   Nature Communications

Cancer heterogeneity is not compatible with one unique cancer cell metabolic map

(2016) A Strickaert et al.   ONCOGENE

Tissue-based map of the human proteome

(2015) M. Uhlen et al.   SCIENCE

Suppression of Peptide Sample Losses in Autosampler Vials

(2013) Karel Stejskal et al.   JOURNAL OF PROTEOME RESEARCH

Measuring and Managing Ratio Compression for Accurate iTRAQ/TMT Quantification

(2013) Mikhail M. Savitski et al.   JOURNAL OF PROTEOME RESEARCH

Increasing the Multiplexing Capacity of TMTs Using Reporter Ion Isotopologues with Isobaric Masses

(2012) Graeme C. McAlister et al.   ANALYTICAL CHEMISTRY

The importance of using the optimal plasticware and glassware in studies involving peptides

(2011) Miriam Goebel-Stengel et al.   ANALYTICAL BIOCHEMISTRY

Delayed Fragmentation and Optimized Isolation Width Settings for Improvement of Protein Identification and Accuracy of Isobaric Mass Tag Quantification on Orbitrap-Type Mass Spectrometers

(2011) Mikhail M. Savitski et al.   ANALYTICAL CHEMISTRY

Hallmarks of Cancer: The Next Generation

(2011) Douglas Hanahan et al.   CELL

Minimising iTRAQ ratio compression through understanding LC-MS elution dependence and high-resolution HILIC fractionation

(2011) Saw Yen Ow et al.   PROTEOMICS