Rapid genome-wide evolution in Brassica rapa populations following drought revealed by sequencing of ancestral and descendant gene pools

Increased susceptibility to fungal disease accompanies adaptation to drought inBrassica rapa

(2015) Niamh B. O'Hara et al.   EVOLUTION

Contemporary evolution of plant reproductive strategies under global change is revealed by stored seeds

(2015) M. Thomann et al.   JOURNAL OF EVOLUTIONARY BIOLOGY

Towards the identification of the loci of adaptive evolution

(2015) Carolina Pardo-Diaz et al.   Methods in Ecology and Evolution

Analysis of population genetic structure and gene flow in an annual plant before and after a rapid evolutionary response to drought

(2015) Rachel S. Welt et al.   AoB Plants

The predictability of molecular evolution during functional innovation

(2014) D. Blank et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Pervasive selection or is it…? why areFSToutliers sometimes so frequent?

(2013) Nicolas Bierne et al.   MOLECULAR ECOLOGY

Detecting selection along environmental gradients: analysis of eight methods and their effectiveness for outbreeding and selfing populations

(2013) Stéphane De Mita et al.   MOLECULAR ECOLOGY

Adaptive Evolution of Multiple Traits Through Multiple Mutations at a Single Gene

(2013) C. R. Linnen et al.   SCIENCE

Genetics of Climate Change Adaptation

(2012) Steven J. Franks et al.   Annual Review of Genetics

The genomic basis of adaptive evolution in threespine sticklebacks

(2012) Felicity C. Jones et al.   NATURE

Characterization of SOC1's Central Role in Flowering by the Identification of Its Upstream and Downstream Regulators

(2012) R. G. H. Immink et al.   PLANT PHYSIOLOGY

Evolution of wild cereals during 28 years of global warming in Israel

(2012) E. Nevo et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

PoPoolation DB: a user-friendly web-based database for the retrieval of natural polymorphisms in Drosophila

(2011) Ram Pandey et al.   BMC GENETICS

BRAD, the genetics and genomics database for Brassica plants

(2011) Feng Cheng et al.   BMC PLANT BIOLOGY

Comparison ofFSToutlier tests for SNP loci under selection

(2011) SHAWN R. NARUM et al.   Molecular Ecology Resources

The genome of the mesopolyploid crop species Brassica rapa

(2011) Xiaowu Wang et al.   NATURE GENETICS

Plasticity and evolution in drought avoidance and escape in the annual plant Brassica rapa

(2011) Steven J. Franks   NEW PHYTOLOGIST

PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals

(2011) Robert Kofler et al.   PLoS One

A Map of Local Adaptation in Arabidopsis thaliana

(2011) A. Fournier-Level et al.   SCIENCE

Adaptation to Climate Across the Arabidopsis thaliana Genome

(2011) A. M. Hancock et al.   SCIENCE

Genome-wide analysis of a long-term evolution experiment with Drosophila

(2010) Molly K. Burke et al.   NATURE

Population resequencing reveals local adaptation of Arabidopsis lyrata to serpentine soils

(2010) Thomas L Turner et al.   NATURE GENETICS

Gene function analysis in complex data sets using ErmineJ

(2010) Jesse Gillis et al.   Nature Protocols

Reference Gene Selection for Real-Time Quantitative Polymerase Chain Reaction of mRNA Transcript Levels in Chinese Cabbage (Brassica rapa L. ssp. pekinensis)

(2010) Jiani Qi et al.   PLANT MOLECULAR BIOLOGY REPORTER

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Fast and accurate short read alignment with Burrows-Wheeler transform

(2009) H. Li et al.   BIOINFORMATICS

Climate change alters reproductive isolation and potential gene flow in an annual plant

(2009) Steven J. Franks et al.   Evolutionary Applications

Is Genetic Evolution Predictable?

(2009) D. L. Stern et al.   SCIENCE

Harnessing genomics for evolutionary insights

(2009) Antonis Rokas et al.   TRENDS IN ECOLOGY & EVOLUTION

The Resurrection Initiative: Storing Ancestral Genotypes to Capture Evolution in Action

(2008) Steven J. Franks et al.   BIOSCIENCE

A change in climate causes rapid evolution of multiple life-history traits and their interactions in an annual plant

(2008) S. J. FRANKS et al.   JOURNAL OF EVOLUTIONARY BIOLOGY