Evolution of GOUNDRY, a cryptic subgroup of Anopheles gambiae s.l ., and its impact on susceptibility to Plasmodium infection

Reticulate Speciation and Barriers to Introgression in theAnopheles gambiaeSpecies Complex

(2015) Jacob E. Crawford et al.   Genome Biology and Evolution

The kdr-bearing haplotype and susceptibility to Plasmodium falciparum in Anopheles gambiae: genetic correlation and functional testing

(2015) Christian Mitri et al.   MALARIA JOURNAL

High Levels of Hybridization between Molecular Forms of Anopheles gambiae from Guinea Bissau

(2015) E. Oliveira et al.   JOURNAL OF MEDICAL ENTOMOLOGY

FSuite: exploiting inbreeding in dense SNP chip and exome data

(2014) Steven Gazal et al.   BIOINFORMATICS

ANGSD: Analysis of Next Generation Sequencing Data

(2014) Thorfinn Sand Korneliussen et al.   BMC BIOINFORMATICS

Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow

(2014) Tami E. Cruickshank et al.   MOLECULAR ECOLOGY

Signatures of aestivation and migration in Sahelian malaria mosquito populations

(2014) A. Dao et al.   NATURE

Extensive introgression in a malaria vector species complex revealed by phylogenomics

(2014) M. C. Fontaine et al.   SCIENCE

Estimating inbreeding coefficients from NGS data: Impact on genotype calling and allele frequency estimation

(2013) Filipe G. Vieira et al.   GENOME RESEARCH

Equivalent susceptibility of Anopheles gambiae M and S molecular forms and Anopheles arabiensis to Plasmodium falciparum infection in Burkina Faso

(2013) Awa Gnémé et al.   MALARIA JOURNAL

Spatiotemporal dynamics of gene flow and hybrid fitness between the M and S forms of the malaria mosquito, Anopheles gambiae

(2013) Y. Lee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Global malaria mortality between 1980 and 2010: a systematic analysis

(2012) Christopher JL Murray et al.   LANCET

SNP Calling, Genotype Calling, and Sample Allele Frequency Estimation from New-Generation Sequencing Data

(2012) Rasmus Nielsen et al.   PLoS One

Population Genomics of Inversion Polymorphisms in Drosophila melanogaster

(2012) Russell B. Corbett-Detig et al.   PLoS Genetics

Consanguinity around the world: what do the genomic data of the HGDP-CEPH diversity panel tell us?

(2011) Anne-Louise Leutenegger et al.   EUROPEAN JOURNAL OF HUMAN GENETICS

A framework for variation discovery and genotyping using next-generation DNA sequencing data

(2011) Mark A DePristo et al.   NATURE GENETICS

The “Far-West” of Anopheles gambiae Molecular Forms

(2011) Beniamino Caputo et al.   PLoS One

A Cryptic Subgroup of Anopheles gambiae Is Highly Susceptible to Human Malaria Parasites

(2011) M. M. Riehle et al.   SCIENCE

Genome mapping and characterization of the Anopheles gambiae heterochromatin

(2010) Maria V Sharakhova et al.   BMC GENOMICS

Reducing Plasmodium falciparum Malaria Transmission in Africa: A Model-Based Evaluation of Intervention Strategies

(2010) Jamie T. Griffin et al.   PLOS MEDICINE

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

Circos: An information aesthetic for comparative genomics

(2009) M. Krzywinski et al.   GENOME RESEARCH

Islands of speciation or mirages in the desert? Examining the role of restricted recombination in maintaining species

(2009) M A F Noor et al.   HEREDITY

Inferring the Joint Demographic History of Multiple Populations from Multidimensional SNP Frequency Data

(2009) Ryan N. Gutenkunst et al.   PLoS Genetics

Living at the edge: biogeographic patterns of habitat segregation conform to speciation by niche expansion in Anopheles gambiae

(2009) Carlo Costantini et al.   BMC ECOLOGY

Dynamics of transmission of Plasmodium falciparum by Anopheles arabiensis and the molecular forms M and S of Anopheles gambiae in Dielmo, Senegal

(2008) Mamadou Ndiath et al.   MALARIA JOURNAL

Insertion polymorphisms of SINE200 retrotransposons within speciation islands of Anopheles gambiae molecular forms

(2008) Federica Santolamazza et al.   MALARIA JOURNAL