Phylogenetic, virulence and antibiotic resistance characteristics of commensal strain populations of Escherichia coli from community subjects in the Paris area in 2010 and evolution over 30 years

Guide to the various phylogenetic classification schemes for Escherichia coli and the correspondence among schemes

(2015) Olivier Clermont et al.   MICROBIOLOGY-SGM

Escherichia coli ST131, an Intriguing Clonal Group

(2014) M.-H. Nicolas-Chanoine et al.   CLINICAL MICROBIOLOGY REVIEWS

The high prevalence of serine protease autotransporters of Enterobacteriaceae (SPATEs) in Escherichia coli causing neonatal septicemia

(2014) R. Tapader et al.   EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES

Rapid and Specific Detection, Molecular Epidemiology, and Experimental Virulence of the O16 Subgroup within Escherichia coli Sequence Type 131

(2014) J. R. Johnson et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Development of an allele-specific PCR for Escherichia coli B2 sub-typing, a rapid and easy to perform substitute of multilocus sequence typing

(2014) Olivier Clermont et al.   JOURNAL OF MICROBIOLOGICAL METHODS

Characterization of Fecal Extended-Spectrum-β-Lactamase-Producing Escherichia coli in a Remote Community during a Long Time Period

(2013) Paul-Louis Woerther et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Real-Time PCR for Quantitative Analysis of Human Commensal Escherichia coli Populations Reveals a High Frequency of Subdominant Phylogroups

(2013) M. Smati et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pathophysiology of Escherichia coli ventilator-associated pneumonia: implication of highly virulent extraintestinal pathogenic strains

(2012) Jonathan Messika et al.   INTENSIVE CARE MEDICINE

10-Fold increase (2006-11) in the rate of healthy subjects with extended-spectrum  -lactamase-producing Escherichia coli faecal carriage in a Parisian check-up centre

(2012) M.-H. Nicolas-Chanoine et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

CommensalEscherichia colistrains in Guiana reveal a high genetic diversity with host-dependant population structure

(2012) Mathilde Lescat et al.   Environmental Microbiology Reports

The ClermontEscherichia coliphylo-typing method revisited: improvement of specificity and detection of new phylo-groups

(2012) Olivier Clermont et al.   Environmental Microbiology Reports

The gut is the epicentre of antibiotic resistance

(2012) Jean Carlet   Antimicrobial Resistance and Infection Control

Characterization of the cryptic Escherichia lineages: rapid identification and prevalence

(2011) Olivier Clermont et al.   ENVIRONMENTAL MICROBIOLOGY

Animal and human pathogenic Escherichia coli strains share common genetic backgrounds

(2011) Olivier Clermont et al.   INFECTION GENETICS AND EVOLUTION

Sequence types and plasmid carriage of uropathogenic Escherichia coli devoid of phenotypically detectable resistance

(2011) S. Bengtsson et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Population structure, virulence potential and antibiotic susceptibility of uropathogenic Escherichia coli from Northwest England

(2011) T. M. Gibreel et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Escherichia coli Isolates Causing Bacteremia via Gut Translocation and Urinary Tract Infection in Young Infants Exhibit Different Virulence Genotypes

(2011) Farah Mahjoub-Messai et al.   JOURNAL OF INFECTIOUS DISEASES

Phylogenetic Groups and Pathogenicity Island Markers in Fecal Escherichia coli Isolates from Asymptomatic Humans in China

(2010) B. Li et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Pathogenicity-Associated Islands in Extraintestinal Pathogenic Escherichia coli Are Fitness Elements Involved in Intestinal Colonization

(2010) M. Diard et al.   JOURNAL OF BACTERIOLOGY

Meningitis Caused by Escherichia coli Producing TEM-52 Extended-Spectrum  -Lactamase within an Extensive Outbreak in a Neonatal Ward: Epidemiological Investigation and Characterization of the Strain

(2010) D. Moissenet et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Distribution of Human Commensal Escherichia coli Phylogenetic Groups

(2010) J. K. Bailey et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Host Factors and Portal of Entry Outweigh Bacterial Determinants To Predict the Severity of Escherichia coli Bacteremia

(2010) A. Lefort et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Genetic Diversity and Virulence Profiles of Escherichia coli Isolates Causing Spontaneous Bacterial Peritonitis and Bacteremia in Patients with Cirrhosis

(2010) F. Bert et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Commensal Escherichia coli of healthy humans: a reservoir for antibiotic-resistance determinants

(2010) J. K. Bailey et al.   JOURNAL OF MEDICAL MICROBIOLOGY

The population genetics of commensal Escherichia coli

(2010) Olivier Tenaillon et al.   NATURE REVIEWS MICROBIOLOGY

Absence of Escherichia coli Phylogenetic Group B2 Strains in Humans and Domesticated Animals from Jeonnam Province, Republic of Korea

(2009) T. Unno et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Cryptic Lineages of the Genus Escherichia

(2009) S. T. Walk et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Role of Intraspecies Recombination in the Spread of Pathogenicity Islands within the Escherichia coli Species

(2009) Sören Schubert et al.   PLoS Pathogens

Evidence for a human-specific Escherichia coli clone

(2008) Olivier Clermont et al.   ENVIRONMENTAL MICROBIOLOGY

Molecular Epidemiology and Phylogenetic Distribution of the Escherichia coli pks Genomic Island

(2008) J. R. Johnson et al.   JOURNAL OF CLINICAL MICROBIOLOGY