Community genetics of the key plant species Carex gayana in high Andean wetlands and conservation implications

Neutral and adaptive genetic diversity in plants: An overview

(2023) Mi Yoon Chung et al.   Frontiers in Ecology and Evolution

Thirty years of resistance: Zig-zag through the plant immune system

(2022) Bruno Pok Man Ngou et al.   PLANT CELL

Draft genomes assembly and annotation of Carex parvula and Carex kokanica reveals stress-specific genes

(2022) Guangpeng Qu et al.   Scientific Reports

Species–genetic diversity correlations through the lens of spatial autocorrelation: insights from high Andean wetlands

(2022) Angéline Bertin et al.   LANDSCAPE ECOLOGY

Spatial autocorrelation signatures of ecological determinants on plant community characteristics in high Andean wetlands

(2022) Adriana Lozada et al.   Scientific Reports

Cold adaptation strategies in plants—An emerging role of epigenetics and antifreeze proteins to engineer cold resilient plants

(2022) Satyakam et al.   Frontiers in Genetics

The chromosome-scale genome of Kobresia myosuroides sheds light on karyotype evolution and recent diversification of a dominant herb group on the Qinghai-Tibet Plateau

(2022) Yu Ning et al.   DNA RESEARCH

The EDS1–PAD4–ADR1 node mediates Arabidopsis pattern-triggered immunity

(2021) Rory N. Pruitt et al.   NATURE

Linked selection shapes the landscape of genomic variation in three oak species

(2021) Yi‐Ye Liang et al.   NEW PHYTOLOGIST

Above- and belowground community linkages in boreal peatlands

(2020) Caitlyn L. Lyons et al.   PLANT ECOLOGY

The CBL–CIPK Pathway in Plant Response to Stress Signals

(2020) Xiao Ma et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Patch‐level facilitation fosters high‐Andean plant diversity at regional scales

(2020) Sabrina S. Gavini et al.   JOURNAL OF VEGETATION SCIENCE

Genome sequence of Kobresia littledalei, the first chromosome-level genome in the family Cyperaceae

(2020) Muyou Can et al.   Scientific Data

Genomic signatures of convergent adaptation to Alpine environments in three Brassicaceae species

(2020) Christian Rellstab et al.   MOLECULAR ECOLOGY

Genome-wide genetic diversity yields insights into genomic responses of candidate climate-selected loci in an Andean wetland plant

(2020) Angéline Bertin et al.   Scientific Reports

Structural Aspects of DNA Repair and Recombination in Crop Improvement

(2020) Prabha Verma et al.   Frontiers in Genetics

Lectin Receptor-Like Kinases: The Sensor and Mediator at the Plant Cell Surface

(2020) Yali Sun et al.   Frontiers in Plant Science

Protocol Update for large-scale genome and gene function analysis with the PANTHER classification system (v.14.0)

(2019) Huaiyu Mi et al.   Nature Protocols

Linking plant genes to insect communities: Identifying the genetic bases of plant traits and community composition

(2019) Hilary L. Barker et al.   MOLECULAR ECOLOGY

Putting the genes into community genetics

(2019) Gina M. Wimp et al.   MOLECULAR ECOLOGY

Does genomic variation in a foundation species predict arthropod community structure in a riparian forest?

(2018) Shinnosuke Kagiya et al.   MOLECULAR ECOLOGY

Common garden experiments disentangle plant genetic and environmental contributions to ectomycorrhizal fungal community structure

(2018) Adair Patterson et al.   NEW PHYTOLOGIST

Conservation of adaptive potential and functional diversity: integrating old and new approaches

(2018) Barbara K. Mable   CONSERVATION GENETICS

A critique for eco-evolutionary dynamics

(2018) Andrew P. Hendry   FUNCTIONAL ECOLOGY

Partitioning genetic and species diversity refines our understanding of species–genetic diversity relationships

(2018) Vera Wilder Pfeiffer et al.   Ecology and Evolution

Insect pollinators collect pollen from wind-pollinated plants: implications for pollination ecology and sustainable agriculture

(2017) Manu E. Saunders   Insect Conservation and Diversity

Spatial detection of outlier loci with Moran eigenvector maps

(2017) Helene H. Wagner et al.   Molecular Ecology Resources

RADseq provides unprecedented insights into molecular ecology and evolutionary genetics: comment on Breaking RAD by Lowry et al . (2016)

(2017) Garrett J. McKinney et al.   Molecular Ecology Resources

Unbroken: RADseq remains a powerful tool for understanding the genetics of adaptation in natural populations

(2017) Julian M. Catchen et al.   Molecular Ecology Resources

The Sphagnome Project: enabling ecological and evolutionary insights through a genus-level sequencing project

(2017) David J. Weston et al.   NEW PHYTOLOGIST

Estimating belowground carbon stocks in peatlands of the Ecuadorian páramo using ground-penetrating radar (GPR)

(2017) Xavier Comas et al.   Journal of Geophysical Research-Biogeosciences

myGenomeBrowser: building and sharing your own genome browser

(2016) Sébastien Carrere et al.   BIOINFORMATICS

Genetic variation of loci potentially under selection confounds species-genetic diversity correlations in a fragmented habitat

(2016) Angeline Bertin et al.   MOLECULAR ECOLOGY

pcadapt: anRpackage to perform genome scans for selection based on principal component analysis

(2016) Keurcien Luu et al.   Molecular Ecology Resources

How Do Species Interactions Affect Evolutionary Dynamics Across Whole Communities?

(2015) Timothy G. Barraclough   Annual Review of Ecology Evolution and Systematics

Physiological, biochemical and proteomics analysis reveals the adaptation strategies of the alpine plant Potentilla saundersiana at altitude gradient of the Northwestern Tibetan Plateau

(2015) Lan Ma et al.   Journal of Proteomics

Detecting Genomic Signatures of Natural Selection with Principal Component Analysis: Application to the 1000 Genomes Data

(2015) Nicolas Duforet-Frebourg et al.   MOLECULAR BIOLOGY AND EVOLUTION

Genomic resources and their influence on the detection of the signal of positive selection in genome scans

(2015) S. Manel et al.   MOLECULAR ECOLOGY

A community genetics perspective: opportunities for the coming decade

(2015) Gregory M. Crutsinger   NEW PHYTOLOGIST

Landscape community genomics: understanding eco-evolutionary processes in complex environments

(2015) Brian K. Hand et al.   TRENDS IN ECOLOGY & EVOLUTION

Generating spatially constrained null models for irregularly spaced data using Moran spectral randomization methods

(2015) Helene H. Wagner et al.   Methods in Ecology and Evolution

Genetic diversity and connectivity shape herbivore load within an oak population at its range limit

(2015) Tähti Pohjanmies et al.   Ecosphere

lavaan: AnRPackage for Structural Equation Modeling

(2015) Yves Rosseel   Journal of Statistical Software

Where Is the Extended Phenotype in the Wild? The Community Composition of Arthropods on Mature Oak Trees Does Not Depend on the Oak Genotype

(2015) Martin M. Gossner et al.   PLoS One

Aquatic plant composition and environmental relationships in grazed Northwest Patagonian wetlands, Argentina

(2014) Adriana Mabel Kutschker et al.   ECOLOGICAL ENGINEERING

Effects of wind-driven spatial structure and environmental heterogeneity on high-altitude wetland macroinvertebrate assemblages with contrasting dispersal modes

(2014) Angéline Bertin et al.   FRESHWATER BIOLOGY

Facilitative plant interactions and climate simultaneously drive alpine plant diversity

(2013) Lohengrin A. Cavieres et al.   ECOLOGY LETTERS

Community genetics in the time of next-generation molecular technologies

(2013) Felix Gugerli et al.   MOLECULAR ECOLOGY

Uncovering the genetic basis of adaptive change: on the intersection of landscape genomics and theoretical population genetics

(2013) Stéphane Joost et al.   MOLECULAR ECOLOGY

Insight into the Genetic Components of Community Genetics: QTL Mapping of Insect Association in a Fast-Growing Forest Tree

(2013) Jennifer DeWoody et al.   PLoS One

Switchgrass Genomic Diversity, Ploidy, and Evolution: Novel Insights from a Network-Based SNP Discovery Protocol

(2013) Fei Lu et al.   PLoS Genetics

Pollen diversity collected by honey bees in the vicinity of Vaccinium spp. crops and its importance for colony development1This article is part of a Special Issue entitled “Pollination biology research in Canada: Perspectives on a mutualism at different scales”.

(2012) Mélissa Girard et al.   Botany

Community ecology in the age of multivariate multiscale spatial analysis

(2012) S. Dray et al.   ECOLOGICAL MONOGRAPHS

Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

(2012) STÉPHANIE MANEL et al.   MOLECULAR ECOLOGY

The resilience and functional role of moss in boreal and arctic ecosystems

(2012) M. R. Turetsky et al.   NEW PHYTOLOGIST

Evolutionary and plastic rescue in multitrophic model communities

(2012) C. Kovach-Orr et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Linking genes to communities and ecosystems: Daphnia as an ecogenomic model

(2012) B. E. Miner et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The variant call format and VCFtools

(2011) P. Danecek et al.   BIOINFORMATICS

Next-generation RAD sequencing identifies thousands of SNPs for assessing hybridization between rainbow and westslope cutthroat trout

(2011) PAUL A. HOHENLOHE et al.   Molecular Ecology Resources

High plant diversity is needed to maintain ecosystem services

(2011) Forest Isbell et al.   NATURE

Community genetics: what have we accomplished and where should we be going?

(2011) E. I. Hersch-Green et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Chalcone synthase and its functions in plant resistance

(2011) T. T. H. Dao et al.   PHYTOCHEMISTRY REVIEWS

The family of terpene synthases in plants: a mid-size family of genes for specialized metabolism that is highly diversified throughout the kingdom

(2011) Feng Chen et al.   PLANT JOURNAL

A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species

(2011) Robert J. Elshire et al.   PLoS One

Why intraspecific trait variation matters in community ecology

(2011) Daniel I. Bolnick et al.   TRENDS IN ECOLOGY & EVOLUTION

Potential impacts of climate change on the environmental services of humid tropical alpine regions

(2010) Wouter Buytaert et al.   GLOBAL ECOLOGY AND BIOGEOGRAPHY

Functional characterization of drought-responsive aquaporins in Populus balsamifera and Populus simonii×balsamifera clones with different drought resistance strategies

(2010) Adriana M. Almeida-Rodriguez et al.   PHYSIOLOGIA PLANTARUM

Arginine methylation mediated by the Arabidopsis homolog of PRMT5 is essential for proper pre-mRNA splicing

(2010) X. Deng et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Mountain Fen Distribution, Types and Restoration Priorities, San Juan Mountains, Colorado, USA

(2010) Rod A. Chimner et al.   WETLANDS

Beyond description: the active and effective way to infer processes from spatial patterns

(2009) Eliot J. B. McIntire et al.   ECOLOGY

FORWARD SELECTION OF EXPLANATORY VARIABLES

(2008) F. Guillaume Blanchet et al.   ECOLOGY

Ecological consequences of genetic diversity

(2008) A. Randall Hughes et al.   ECOLOGY LETTERS

A Genome-Scan Method to Identify Selected Loci Appropriate for Both Dominant and Codominant Markers: A Bayesian Perspective

(2008) M. Foll et al.   GENETICS