Comparative genome analysis of Pasteurella multocida strains of porcine origin

Comparative genome analysis of Pasteurella multocida serogroup B:2 strains causing haemorrhagic septicaemia (HS) in bovines

(2022) Awadhesh Prajapati et al.   GENE

Prediction of Pasteurella multocida serotypes based on whole genomic sequences

(2022) Henrik Christensen et al.   VETERINARY MICROBIOLOGY

Comparative genomics of the Pasteurella multocida toxin

(2021) Shivakumara Siddaramappa   GENOME

Genomic diversity and molecular epidemiology of Pasteurella multocida

(2021) Emily Smith et al.   PLoS One

Assessment of Lung Disease in Finishing Pigs at Slaughter: Pulmonary Lesions and Implications on Productivity Parameters

(2021) Yania Paz-Sánchez et al.   Animals

Variability in in vitro biofilm production and antimicrobial sensitivity pattern among Pasteurella multocida strains

(2020) Awadhesh Prajapati et al.   BIOFOULING

Bacterial ‘Grounded’ Prophages: Hotspots for Genetic Renovation and Innovation

(2019) Bhaskar Chandra Mohan Ramisetty et al.   Frontiers in Genetics

Characterisation of Pasteurella multocida isolates from pigs with pneumonia in Korea

(2019) Jongho Kim et al.   BMC Veterinary Research

M1CR0B1AL1Z3R—a user-friendly web server for the analysis of large-scale microbial genomics data

(2019) Oren Avram et al.   NUCLEIC ACIDS RESEARCH

Comparative genome analysis reveals niche-specific genome expansion in Acinetobacter baumannii strains

(2019) Harshita Yakkala et al.   PLoS One

Pasteurella multocida: Genotypes and Genomics

(2019) Zhong Peng et al.   MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS

The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities

(2019) James J Davis et al.   NUCLEIC ACIDS RESEARCH

Comparative analysis of core genome MLST and SNP typing within a European Salmonella serovar Enteritidis outbreak

(2018) Madison E. Pearce et al.   INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY

Genetic and Phylogenetic Characteristics of Pasteurella multocida Isolates From Different Host Species

(2018) Zhong Peng et al.   Frontiers in Microbiology

VFDB 2019: a comparative pathogenomic platform with an interactive web interface

(2018) Bo Liu et al.   NUCLEIC ACIDS RESEARCH

Antibiotic Resistance Mechanisms in Bacteria: Relationships Between Resistance Determinants of Antibiotic Producers, Environmental Bacteria, and Clinical Pathogens

(2018) Elizabeth Peterson et al.   Frontiers in Microbiology

Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies

(2017)   INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY

Failure of phylogeny inferred from multilocus sequence typing to represent bacterial phylogeny

(2017) Alan K. L. Tsang et al.   Scientific Reports

The Myriad Properties of Pasteurella multocida Lipopolysaccharide

(2017) et al.   Toxins

An Assessment of Different Genomic Approaches for Inferring Phylogeny of Listeria monocytogenes

(2017) Clémentine Henri et al.   Frontiers in Microbiology

Genome-Wide Analyses Reveal Genes Subject to Positive Selection in Pasteurella multocida

(2017) Peili Cao et al.   Frontiers in Microbiology

NCBI prokaryotic genome annotation pipeline

(2016) Tatiana Tatusova et al.   NUCLEIC ACIDS RESEARCH

boral - Bayesian Ordination and Regression Analysis of Multivariate Abundance Data in r

(2016) Francis K.C. Hui   Methods in Ecology and Evolution

First detection ofPasteurella multocidatype B:2 in Hungary associated with systemic pasteurellosis in backyard pigs

(2015) Barbara Ujvári et al.   ACTA VETERINARIA HUNGARICA

Roary: rapid large-scale prokaryote pan genome analysis

(2015) Andrew J. Page et al.   BIOINFORMATICS

Pasteurella multocida type A as the primary agent of pneumonia and septicaemia in pigs

(2015) João X. de Oliveira Filho et al.   PESQUISA VETERINARIA BRASILEIRA

Recombinant transferrin binding protein A (rTbpA) fragments of Pasteurella multocida serogroup B:2 provide variable protection following homologous challenge in mouse model

(2015) Sathish Bhadravati Shivachandra et al.   RESEARCH IN VETERINARY SCIENCE

Pasteurella multocida type A as the primary agent of pneumonia and septicaemia in pigs

(2015) João X. de Oliveira Filho et al.   PESQUISA VETERINARIA BRASILEIRA

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

Development of a Rapid Multiplex PCR Assay To Genotype Pasteurella multocida Strains by Use of the Lipopolysaccharide Outer Core Biosynthesis Locus

(2014) Marina Harper et al.   JOURNAL OF CLINICAL MICROBIOLOGY

Solving the Problem of Comparing Whole Bacterial Genomes across Different Sequencing Platforms

(2014) Rolf S. Kaas et al.   PLoS One

Molecular Epidemiology ofPasteurella multocidaCirculating in India by Multilocus Sequence Typing

(2014) L. N. Sarangi et al.   Transboundary and Emerging Diseases

Pasteurella multocida: from Zoonosis to Cellular Microbiology

(2013) B. A. Wilson et al.   CLINICAL MICROBIOLOGY REVIEWS

Multilocus sequence analysis of Pasteurella multocida demonstrates a type species under development

(2013) M. Bisgaard et al.   MICROBIOLOGY-SGM

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS

Multilocus sequence typing of a global collection of Pasteurella multocida isolates from cattle and other host species demonstrates niche association

(2011) Emily J Hotchkiss et al.   BMC MICROBIOLOGY

A review of hemorrhagic septicemia in cattle and buffalo

(2011) S. B. Shivachandra et al.   ANIMAL HEALTH RESEARCH REVIEWS

Fast and accurate long-read alignment with Burrows–Wheeler transform

(2010) Heng Li et al.   BIOINFORMATICS

BEDTools: a flexible suite of utilities for comparing genomic features

(2010) Aaron R. Quinlan et al.   BIOINFORMATICS

The Sequence Alignment/Map format and SAMtools

(2009) H. Li et al.   BIOINFORMATICS

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS