New algorithm for the analysis of nucleotide and amino acid evolutionary relationships based on Klein four-group

Identifying and addressing methodological incongruence in phylogenomics: A review

(2023) James F. Fleming et al.   Evolutionary Applications

Natural History of DNA-Dependent DNA Polymerases: Multiple Pathways to the Origins of DNA

(2023) Sávio Torres de Farias et al.   Viruses-Basel

Relational model of the standard genetic code

(2021) Paško Konjevoda et al.   BIOSYSTEMS

Overview of the third special issue in code biology

(2021) Marcello Barbieri   BIOSYSTEMS

Exposure to sub-inhibitory ciprofloxacin and nitrofurantoin concentrations increases recA gene expression in uropathogenic Escherichia coli: The role of RecA protein as a drug target

(2020) Ághata Cardoso da Silva Ribeiro et al.   EUROPEAN JOURNAL OF PHARMACEUTICAL SCIENCES

Structural insights into the inhibition of bacterial RecA by naphthalene polysulfonated compounds

(2020) Ziyuan Zhou et al.   iScience

A general model on the origin of biological codes

(2019) Marcello Barbieri   BIOSYSTEMS

Determining Amino Acid Scores of the Genetic Code Table: Complementarity, Structure, Function and Evolution

(2019) Nikola Štambuk et al.   BIOSYSTEMS

RecA and DNA recombination: a review of molecular mechanisms

(2019) Elsa del Val et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

Evolution of the genetic code: The ambiguity-reduction theory

(2019) Marcello Barbieri   BIOSYSTEMS

A discriminative test among the different theories proposed to explain the origin of the genetic code: The coevolution theory finds additional support

(2018) Massimo Di Giulio   BIOSYSTEMS

What is code biology?

(2018) Marcello Barbieri   BIOSYSTEMS

RecA a universal drug target in pathogenic bacteria

(2018) Athanasia Pavlopoulou   Frontiers in Bioscience-Landmark

Trends in substitution models of molecular evolution

(2015) Miguel Arenas   Frontiers in Genetics

Causes, consequences and solutions of phylogenetic incongruence

(2014) A. Som   BRIEFINGS IN BIOINFORMATICS

Suramin is a potent and selective inhibitor of Mycobacterium tuberculosis RecA protein and the SOS response: RecA as a potential target for antibacterial drug discovery

(2014) Astha Nautiyal et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Unipro UGENE: a unified bioinformatics toolkit

(2012) Konstantin Okonechnikov et al.   BIOINFORMATICS

New Drugs for the Treatment of Tuberculosis: Needs, Challenges, Promise, and Prospects for the Future

(2012) Christian Lienhardt et al.   JOURNAL OF INFECTIOUS DISEASES

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

Codepoiesis – the Deep Logic of Life

(2012) Marcello Barbieri   Biosemiotics

On the Group of Automorphisms of a Group

(2011) Marian Deaconescu et al.   AMERICAN MATHEMATICAL MONTHLY

The close relationship between the biosynthetic families of amino acids and the organisation of the genetic code

(2009) Massimo Di Giulio et al.   GENE

Natural selection and phylogenetic analysis

(2009) S. V. Edwards   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

An extension of the coevolution theory of the origin of the genetic code

(2008) Massimo Di Giulio   Biology Direct

Mechanism of homologous recombination from the RecA–ssDNA/dsDNA structures

(2008) Zhucheng Chen et al.   NATURE