Article
Environmental Sciences
Sharon S. W. Chan, Ho Tin Wong, Marine Thomas, Heidi K. Alleway, Boze Hancock, Bayden D. Russell
Summary: This study evaluated the biodiversity of an abandoned benthic oyster farm and found that it has significant ecological potential, supporting a greater diversity and biomass of benthic flora and fauna.
FRONTIERS IN MARINE SCIENCE
(2022)
Article
Biodiversity Conservation
Brittany R. Williams, Dominic McAfee, Sean D. Connell
Summary: Marine soundscapes provide navigational cues for dispersing organisms, but with habitat loss, these soundscapes are becoming weaker. Using speakers to create healthy soundscapes can attract larvae and enhance recruitment, improving restoration efforts.
JOURNAL OF APPLIED ECOLOGY
(2022)
Article
Fisheries
Elliot Scanes, Pauline M. Ross, Justin R. Seymour, Nachshon Siboni, Michael C. Dove, Wayne A. O'Connor, Callum Dittes, Laura M. Parker
Summary: Ocean acidification can affect marine molluscs, but transgenerational plasticity may mitigate some effects. This study investigated how the microbiome can be influenced by transgenerational exposure to ocean acidification in Sydney Rock oysters. The results showed that parental exposure to elevated PCO2 altered the bacterial community composition in both eggs and larvae, with certain Rhodobacteraceae ASVs increasing or decreasing in abundance. These findings suggest that the transfer of maternal microbiomes to larvae is affected by exposure to ocean acidification and may contribute to transgenerational plasticity.
Review
Environmental Sciences
Melanie J. Bishop, Brendan S. Lanham, Juan R. Esquivel-Muelbert, Victoria J. Cole, Kristine M. Faelnar, Charlotte Jenkins, Jillian Keating, Francisco Martinez-Baena, Wayne A. O'Connor
Summary: This paper examines the potential positive and negative interactions between oyster reef restoration and oyster aquaculture industries. Three key factors influencing the strength and direction of interactions are identified: similarity of focal species, physicochemical and socio-economic environment, and open dialogue and consultation. Positive interactions can be maximized through shared infrastructure, resources, and knowledge, as well as utilization of marine spatial planning tools. Open and inclusive dialogue between industries and stakeholders is crucial for mitigating risk and maximizing positive synergies.
FRONTIERS IN MARINE SCIENCE
(2023)
Article
Evolutionary Biology
Tim P. Bean, Arnaud Tanguy, Carolina Penaloza, Manu Kumar Gundappa, Isabelle Boutet, Ross D. Houston, Daniel J. Macqueen, Pierre Boudry
Summary: This article introduces the publication of two genomes for the European native flat oyster Ostrea edulis, which is a species of significant evolutionary, ecological, and commercial importance. Two independent research groups decided to collaborate and publish separate genome resources for the research community, recognizing the benefit of benchmarking the assemblies together.
EVOLUTIONARY APPLICATIONS
(2022)
Article
Evolutionary Biology
Katherine M. Hornick, Louis Plough
Summary: This study highlights the importance of understanding genetic variation within and among natural populations for conservation and restoration efforts. The research demonstrated the significant impact of hatchery practices on genetic diversity and the role of environmental factors in shaping genetic variation in marine invertebrates. The findings contribute valuable insights for the management of fisheries resources and emphasize the need for careful consideration of genetic diversity in restoration initiatives.
EVOLUTIONARY APPLICATIONS
(2022)
Article
Marine & Freshwater Biology
Alejandro Roman, Hermansyah Prasyad, Simon Oiry, Bede F. R. Davies, Guillaume Brunier, Laurent Barille
Summary: This study used UAV multispectral data and GIS-based analytical methods to extract spatial information on oyster-farming structures in Bourgneuf Bay, France. The results demonstrated that UAV technology can efficiently, rapidly, and non-destructively monitor the extent and characteristics of oyster-farming areas.
ESTUARINE COASTAL AND SHELF SCIENCE
(2023)
Article
Evolutionary Biology
Manu Kumar Gundappa, Carolina Penaloza, Tim Regan, Isabelle Boutet, Arnaud Tanguy, Ross D. Houston, Tim P. Bean, Daniel J. Macqueen
Summary: In this study, we report a chromosome-level assembly and annotation for the European flat oyster genome, which provides valuable genomic resources for conservation and aquaculture efforts. The assembly was verified for accuracy and completeness, and the annotation identified a large number of protein-coding genes. This new reference genome improves our understanding of bivalve genome evolution and enables high-resolution genomics in support of conservation and aquaculture initiatives.
EVOLUTIONARY APPLICATIONS
(2022)
Article
Ecology
Jonathan S. Lefcheck, Bruce W. Pfirrmann, F. Joel Fodrie, Jonathan H. Grabowski, A. Randall Hughes, Ashley R. Smyth
Summary: This study compared the consumption rates of Eastern oysters in biogenic oyster reefs and aquaculture habitats, finding that the rates were contingent on the presence and type of structure. Aquaculture may support comparable or greater consumption rates than natural reefs, playing an important role in maintaining coastal food webs.
JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY
(2021)
Article
Immunology
Shanshan Yao, Li Li, Xudong Guan, Yan He, Aude Jouaux, Fei Xu, Ximing Guo, Guofan Zhang, Linlin Zhang
Summary: By studying the genomic variations associated with herpesvirus-caused mortalities in the Pacific oyster, researchers identified specific genes and polymorphisms that play a crucial role in the antiviral response and resistance. They found that the genes involved in the defense mechanisms differed between larvae and adults, suggesting different genetic mechanisms at different developmental stages. Moreover, key immune response genes, such as those encoding antiviral receptors, showed a strong association between genetic variation and herpesvirus-caused mortality. Overall, this study reveals previously unknown genetic mechanisms and provides valuable insights for breeding oysters with herpesvirus resistance.
FRONTIERS IN IMMUNOLOGY
(2022)
Article
Environmental Sciences
Jason E. Spires, Elizabeth W. North, Stephanie R. Westby, Cecily N. Steppe, James M. Dumhart II, Sierra S. Hildebrandt
Summary: This study aimed to determine if tagging C. virginica with calcein, a fluorochrome dye, could be a viable method for confirming larval origin in studies of direct setting in Chesapeake Bay. A total of 119,020 spat were found, and all of them contained the calcein tag, indicating that these spat were derived from larvae released over the reefs. The observed setting efficiencies and the presence of the calcein mark in recovered spat suggest promise for developing remote larval setting as a stock enhancement technique.
ESTUARIES AND COASTS
(2023)
Article
Environmental Sciences
Micheline S. Labrie, Miles A. Sundermeyer, Brian L. Howes
Summary: This study evaluates the denitrification associated with floating oyster aquaculture in a tidal salt pond in southeastern Massachusetts. The results show that floating oyster aquaculture can enhance sediment denitrification and reduce nitrogen inputs, but its effectiveness is influenced by season, year, and nitrogen deposition. It is necessary to assess its efficacy in reducing nitrogen in coastal embayments typical of southeastern Massachusetts based on specific conditions.
ESTUARIES AND COASTS
(2023)
Article
Fisheries
Cassio de Oliveira Ramos, Francisco Carlos da Silva, Matthew Gray, Carlos Henrique Araujo de Miranda Gomes, Claudio Manoel Rodrigues De Melo
Summary: This study evaluated the impact of initial stocking density and water recirculation rate on larval yield and production of competent larvae in a recirculation aquaculture system. The results showed that the production of Crassostrea gigas larvae was feasible at recommended densities, with the water renewal rate affecting both yield and competent larvae. Oyster cultures with specific stocking densities and water flow rates showed the best results in terms of yield and rate of competent larvae.
AQUACULTURE INTERNATIONAL
(2022)
Article
Environmental Sciences
Brooke A. McIntyre, Erika E. McPhee-Shaw, Marco B. A. Hatch, Shawn M. Arellano
Summary: This study examines the vertical distribution of Olympia oyster larvae in Fidalgo Bay, revealing a pattern of larvae being deeper near slack tide and shallower during faster parts of the tidal cycle. Older, larger larvae are more common at the bottom, and depth does not correlate with specific temperature or chl a levels. These findings suggest that local hydrodynamics play a key role in larval transport and behavior.
ESTUARIES AND COASTS
(2021)
Article
Engineering, Environmental
Nicholas E. Ray, Robinson W. Fulweiler
Summary: In oyster habitats, the sediments show peak carbon dioxide production in spring and summer, as well as consistent methane release into the water column, while nitrous oxide is generally absorbed with occasional release in spring. The overall impact of oysters on sediment greenhouse gas cycling in temperate regions is considered negligible.
ENVIRONMENTAL SCIENCE & TECHNOLOGY
(2021)
Article
Agricultural Engineering
D. W. Fredriksson, C. N. Steppe, L. Luznik, L. Wallendorf, R. H. Mayer
AQUACULTURAL ENGINEERING
(2016)
Article
Ecology
C. N. Steppe, D. W. Fredriksson, L. Wallendorf, M. Nikolov, R. Mayer
MARINE ECOLOGY PROGRESS SERIES
(2016)
Article
Agricultural Engineering
David W. Fredriksson, Cecily N. Steppe, Louise Wallendorf, Stephen Sweeney, David Kriebel
AQUACULTURAL ENGINEERING
(2010)
Article
Biotechnology & Applied Microbiology
Elizabeth A. K. Murphy, Julio M. Barros, Michael P. Schultz, Karen A. Flack, Cecily N. Steppe, Matthew A. Reidenbach
Review
Environmental Sciences
Lauren A. Freeman, D. Reide Corbett, Allison M. Fitzgerald, Daniel A. Lemley, Antonietta Quigg, Cecily N. Steppe
ESTUARIES AND COASTS
(2019)
Article
Biotechnology & Applied Microbiology
Elizabeth A. K. Murphy, Julio M. Barros, Michael P. Schultz, Karen A. Flack, Cecily N. Steppe, Matthew A. Reidenbach
Summary: This study uses high resolution particle image velocimetry to investigate the impact of different types of biofilms on turbulence production, Reynolds shear stress, and rotational flow near the bed. The results show that all biofilms increase these parameters compared to a smooth wall, with non-uniform biofilms having the greatest effect. However, uniform biofilms have a higher drag coefficient compared to non-uniform biofilms.
Article
Environmental Sciences
Jason E. Spires, Elizabeth W. North, Stephanie R. Westby, Cecily N. Steppe, James M. Dumhart II, Sierra S. Hildebrandt
Summary: This study aimed to determine if tagging C. virginica with calcein, a fluorochrome dye, could be a viable method for confirming larval origin in studies of direct setting in Chesapeake Bay. A total of 119,020 spat were found, and all of them contained the calcein tag, indicating that these spat were derived from larvae released over the reefs. The observed setting efficiencies and the presence of the calcein mark in recovered spat suggest promise for developing remote larval setting as a stock enhancement technique.
ESTUARIES AND COASTS
(2023)
Meeting Abstract
Fisheries
Bethany Rahall, Cecily Steppe, Stephanie Reynolds Westby, Patrick Tagan
JOURNAL OF SHELLFISH RESEARCH
(2011)
Article
Marine & Freshwater Biology
Cecily N. Steppe, Charles E. Epifanio
ESTUARINE COASTAL AND SHELF SCIENCE
(2006)
Article
Marine & Freshwater Biology
CE Tilburg, LT Houser, CN Steppe, RW Garvine, CE Epifanio
ESTUARINE COASTAL AND SHELF SCIENCE
(2006)
Article
Ecology
C Petrone, LB Jancaitis, MB Jones, CC Natunewicz, CE Tilburg, CE Epifanio
MARINE ECOLOGY PROGRESS SERIES
(2005)
Article
Ecology
CC Natunewicz, CE Epifanio, RW Garvine
MARINE ECOLOGY PROGRESS SERIES
(2001)
Article
Ecology
CC Natunewicz, CE Epifanio
MARINE ECOLOGY PROGRESS SERIES
(2001)