Tuning the pH Response of i-Motif DNA Oligonucleotides

Regulation of telomeric i-motif stability by 5-methylcytosine and 5-hydroxymethylcytosine modification

(2015) Baochang Xu et al.   ORGANIC & BIOMOLECULAR CHEMISTRY

Crystal violet as an i-motif structure probe for reversible and label-free pH-driven electrochemical switch

(2014) Xi Yuan Zhang et al.   ANALYTICAL BIOCHEMISTRY

Epigenetic Modification, Dehydration, and Molecular Crowding Effects on the Thermodynamics of i-Motif Structure Formation from C-Rich DNA

(2014) Yogini P. Bhavsar-Jog et al.   BIOCHEMISTRY

Construction of DNA logic gates utilizing a H+/Ag+ induced i-motif structure

(2014) Yunhua Shi et al.   CHEMICAL COMMUNICATIONS

The Dynamic Character of the BCL2 Promoter i-Motif Provides a Mechanism for Modulation of Gene Expression by Compounds That Bind Selectively to the Alternative DNA Hairpin Structure

(2014) Samantha Kendrick et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The Transcriptional Complex Between the BCL2 i-Motif and hnRNP LL Is a Molecular Switch for Control of Gene Expression That Can Be Modulated by Small Molecules

(2014) Hyun-Jin Kang et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Base-Pairing Energies of Proton-Bound Homodimers Determined by Guided Ion Beam Tandem Mass Spectrometry: Application to Cytosine and 5-Substituted Cytosines

(2013) Bo Yang et al.   ANALYTICAL CHEMISTRY

Combination of i-Motif and G-Quadruplex Structures within the Same Strand: Formation and Application

(2013) Jun Zhou et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Efficient Electron Transfer in i-Motif DNA with a Tetraplex Structure

(2013) Jungkweon Choi et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Solution equilibria of cytosine- and guanine-rich sequences near the promoter region of the n-myc gene that contain stable hairpins within lateral loops

(2013) Sanae Benabou et al.   BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS

Optimizing the Kinetics and Thermodynamics of DNA i-Motif Folding

(2013) Anna Lena Lieblein et al.   CHEMBIOCHEM

Design and Evaluation of an i-Motif-Based Allosteric Control Mechanism in DNA-Hairpin Molecular Devices

(2013) Irina V. Nesterova et al.   JOURNAL OF PHYSICAL CHEMISTRY B

A method to study in vivo stability of DNA nanostructures

(2013) Sunaina Surana et al.   METHODS

The Effect of Molecular Crowding on the Stability of Human c-MYC Promoter Sequence I-Motif at Neutral pH

(2013) Jingjing Cui et al.   MOLECULES

Recombinant antibody mediated delivery of organelle-specific DNA pH sensors along endocytic pathways

(2013) Souvik Modi et al.   Nanoscale

Two DNA nanomachines map pH changes along intersecting endocytic pathways inside the same cell

(2013) Souvik Modi et al.   Nature Nanotechnology

The Nature of Hydrogen Bonds in Cytidine⋅⋅⋅H+⋅⋅⋅Cytidine DNA Base Pairs

(2012) Anna Lena Lieblein et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Input-Dependent Induction of Oligonucleotide Structural Motifs for Performing Molecular Logic

(2012) Tao Li et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Study of pH-Induced Folding and Unfolding Kinetics of the DNA i-Motif by Stopped-Flow Circular Dichroism

(2012) Chun Chen et al.   LANGMUIR

Contribution of the first K-homology domain of poly(C)-binding protein 1 to its affinity and specificity for C-rich oligonucleotides

(2012) Y. M. K. Yoga et al.   NUCLEIC ACIDS RESEARCH

Crystal violet as a fluorescent switch-on probe for i-motif: label-free DNA-based logic gate

(2011) Dik-Lung Ma et al.   ANALYST

Time-Resolved NMR Spectroscopic Studies of DNA i-Motif Folding Reveal Kinetic Partitioning

(2011) Anna Lena Lieblein et al.   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Biophysical Characterization of an Ensemble of Intramolecular i-Motifs Formed by the Human c-MYC NHE III1 P1 Promoter Mutant Sequence

(2010) Jamie M. Dettler et al.   BIOPHYSICAL JOURNAL

Molecular crowding of the cosolutes induces an intramolecular i-motif structure of triplet repeat DNA oligomers at neutral pH

(2010) Arivazhagan Rajendran et al.   CHEMICAL COMMUNICATIONS

Making sense of G-quadruplex and i-motif functions in oncogene promoters

(2010) Tracy A. Brooks et al.   FEBS Journal

Stimuli-responsive controlled-release system using quadruplex DNA-capped silica nanocontainers

(2010) Cuie Chen et al.   NUCLEIC ACIDS RESEARCH

The role of G-quadruplex/i-motif secondary structures as cis-acting regulatory elements

(2010) Samantha Kendrick et al.   PURE AND APPLIED CHEMISTRY

Photoelectric conversion switch based on quantum dots with i-motif DNA scaffolds

(2009) Haifeng Meng et al.   CHEMICAL COMMUNICATIONS

The Importance of Negative Superhelicity in Inducing the Formation of G-Quadruplex and i-Motif Structures in the c-Myc Promoter: Implications for Drug Targeting and Control of Gene Expression

(2009) Daekyu Sun et al.   JOURNAL OF MEDICINAL CHEMISTRY

A Direct and Nondestructive Approach To Determine the Folding Structure of the I-Motif DNA Secondary Structure by NMR

(2009) Jixun Dai et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

The i-Motif in thebcl-2P1 Promoter Forms an Unexpectedly Stable Structure with a Unique 8:5:7 Loop Folding Pattern

(2009) Samantha Kendrick et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Formation of i-motif structure at neutral and slightly alkaline pH

(2009) Jun Zhou et al.   Molecular BioSystems

A DNA nanomachine that maps spatial and temporal pH changes inside living cells

(2009) Souvik Modi et al.   Nature Nanotechnology

Sensors and regulators of intracellular pH

(2009) Joseph R. Casey et al.   NATURE REVIEWS MOLECULAR CELL BIOLOGY

Structural polymorphism exhibited by a homopurine·homopyrimidine sequence found at the right end of human c-jun protooncogene

(2008) Sarika Saxena et al.   ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS

Gating of Single Synthetic Nanopores by Proton-Driven DNA Molecular Motors

(2008) Fan Xia et al.   JOURNAL OF THE AMERICAN CHEMICAL SOCIETY

Intramolecularly folded G-quadruplex and i-motif structures in the proximal promoter of the vascular endothelial growth factor gene

(2008) K. Guo et al.   NUCLEIC ACIDS RESEARCH

Targeting telomeres and telomerase

(2007) Anne De Cian et al.   BIOCHIMIE