Transient mutation bias increases the predictability of evolution on an empirical genotype–phenotype landscape

Transient mutation bias increases the predictability of evolution on an empirical genotype–phenotype landscape

(2023) James S. Horton et al.   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Population size mediates the contribution of high-rate and large-benefit mutations to parallel evolution

(2022) Martijn F. Schenk et al.   Nature Ecology & Evolution

A Near-Deterministic Mutational Hotspot in Pseudomonas fluorescens Is Constructed by Multiple Interacting Genomic Features

(2022) M J Shepherd et al.   MOLECULAR BIOLOGY AND EVOLUTION

Changes in the distribution of fitness effects and adaptive mutational spectra following a single first step towards adaptation

(2021) Dimitra Aggeli et al.   Nature Communications

A mutational hotspot that determines highly repeatable evolution can be built and broken by silent genetic changes

(2021) James S. Horton et al.   Nature Communications

Mutation bias interacts with composition bias to influence adaptive evolution

(2020) Alejandro V. Cano et al.   PLoS Computational Biology

Predicting mutational routes to new adaptive phenotypes

(2019) Peter A Lind et al.   eLife

Transition bias influences the evolution of antibiotic resistance in Mycobacterium tuberculosis

(2019) Joshua L. Payne et al.   PLOS BIOLOGY

The complex underpinnings of genetic background effects

(2018) Martin N. Mullis et al.   Nature Communications

Epistatic interactions between ancestral genotype and beneficial mutations shape evolvability in Pseudomonas aeruginosa

(2016) Danna R. Gifford et al.   EVOLUTION

Bypass of genetic constraints during mutator evolution to antibiotic resistance

(2015) A. Couce et al.   PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

Evolutionary resurrection of flagellar motility via rewiring of the nitrogen regulation system

(2015) Tiffany B. Taylor et al.   SCIENCE

Experimental evolution reveals hidden diversity in evolutionary pathways

(2015) Peter A Lind et al.   eLife

The biosurfactant viscosin produced byPseudomonas fluorescens SBW25 aids spreading motility and plant growth promotion

(2014) Abdullah S. Alsohim et al.   ENVIRONMENTAL MICROBIOLOGY

Empirical fitness landscapes and the predictability of evolution

(2014) J. Arjan G.M. de Visser et al.   NATURE REVIEWS GENETICS

Global epistasis makes adaptation predictable despite sequence-level stochasticity

(2014) S. Kryazhimskiy et al.   SCIENCE

Mutational Spectrum Drives the Rise of Mutator Bacteria

(2013) Alejandro Couce et al.   PLoS Genetics

Genomic analysis of a key innovation in an experimental Escherichia coli population

(2012) Zachary D. Blount et al.   NATURE

Initial Mutations Direct Alternative Pathways of Protein Evolution

(2011) Merijn L. M. Salverda et al.   PLoS Genetics

Mutagenesis and Functional Characterization of the Four Domains of GlnD, a Bifunctional Nitrogen Sensor Protein

(2010) Y. Zhang et al.   JOURNAL OF BACTERIOLOGY

NtrC-Dependent Regulatory Network for Nitrogen Assimilation in Pseudomonas putida

(2009) A. B. Hervas et al.   JOURNAL OF BACTERIOLOGY