Friunavirus Phage-Encoded Depolymerases Specific to Different Capsular Types of Acinetobacter baumannii

Loss of a Branch Sugar in the Acinetobacter baumannii K3-Type Capsular Polysaccharide Due To Frameshifts in the gtr6 Glycosyltransferase Gene Leads To Susceptibility To Phage APK37.1

(2023) Olga Y. Timoshina et al.   Microbiology Spectrum

Genomic Diversity of Bacteriophages Infecting the Genus Acinetobacter

(2022) Hugo Oliveira et al.   Viruses-Basel

Capsule-Targeting Depolymerases Derived from Acinetobacter baumannii Prophage Regions

(2022) Alena Y. Drobiazko et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Involvement of a Phage-Encoded Wzy Protein in the Polymerization of K127 Units To Form the Capsular Polysaccharide of Acinetobacter baumannii Isolate 36-1454

(2022) Nikolay P. Arbatsky et al.   Microbiology Spectrum

Comparative genomics of Acinetobacter baumannii and therapeutic bacteriophages from a patient undergoing phage therapy

(2022) Mei Liu et al.   Nature Communications

Structure of the capsular polysaccharide of Acinetobacter baumannii MAR 55–66

(2021) N. P. Arbatsky et al.   RUSSIAN CHEMICAL BULLETIN

Highly accurate protein structure prediction with AlphaFold

(2021) John Jumper et al.   NATURE

Novel Acinetobacter baumannii Myovirus TaPaz Encoding Two Tailspike Depolymerases: Characterization and Host-Recognition Strategy

(2021) Anastasia S. Shchurova et al.   Viruses-Basel

Novel Acinetobacter baumannii Bacteriophage Aristophanes Encoding Structural Polysaccharide Deacetylase

(2021) Olga Yu. Timoshina et al.   Viruses-Basel

Novel Klebsiella pneumoniae K23-Specific Bacteriophages From Different Families: Similarity of Depolymerases and Their Therapeutic Potential

(2021) Roman B. Gorodnichev et al.   Frontiers in Microbiology

Updated Analysis of the Surface Carbohydrate Gene Clusters in a Diverse Panel of Acinetobacter baumannii Isolates

(2021) Johanna J. Kenyon et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

The K26 capsular polysaccharide from Acinetobacter baumannii KZ-1098: Structure and cleavage by a specific phage depolymerase

(2021) Anastasiya A. Kasimova et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Correlation of Acinetobacter baumannii K144 and K86 capsular polysaccharide structures with genes at the K locus reveals the involvement of a novel multifunctional rhamnosyltransferase for structural synthesis

(2021) Johanna J. Kenyon et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

Specific Interaction of Novel Friunavirus Phages Encoding Tailspike Depolymerases with Corresponding Acinetobacter baumannii Capsular Types

(2020) A. V. Popova et al.   JOURNAL OF VIROLOGY

Production of the K16 capsular polysaccharide by Acinetobacter baumannii ST25 isolate D4 involves a novel glycosyltransferase encoded in the KL16 gene cluster

(2019) Johanna J. Kenyon et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

The Capsule Depolymerase Dpo48 Rescues Galleria mellonella and Mice From Acinetobacter baumannii Systemic Infections

(2019) Yannan Liu et al.   Frontiers in Microbiology

Characterization of myophage AM24 infecting Acinetobacter baumannii of the K9 capsular type

(2019) Anastasia V. Popova et al.   ARCHIVES OF VIROLOGY

RAxML-NG: a fast, scalable and user-friendly tool for maximum likelihood phylogenetic inference

(2019) Alexey M Kozlov et al.   BIOINFORMATICS

Phage-encoded K2 capsule depolymerase is highly stable, refractory to resistance and protects larvae and mice from Acinetobacter baumannii sepsis

(2019) Hugo Oliveira et al.   APPLIED AND ENVIRONMENTAL MICROBIOLOGY

Acinetobacter baumannii K116 capsular polysaccharide structure is a hybrid of the K14 and revised K37 structures

(2019) Alexander S. Shashkov et al.   CARBOHYDRATE RESEARCH

Structure of the K128 capsular polysaccharide produced by Acinetobacter baumannii KZ-1093 from Kazakhstan

(2019) Nikolay P. Arbatsky et al.   CARBOHYDRATE RESEARCH

DIALS: implementation and evaluation of a new integration package

(2018) Graeme Winter et al.   Acta Crystallographica Section D-Structural Biology

Ability of phages to infect Acinetobacter calcoaceticus-Acinetobacter baumannii complex species through acquisition of different pectate lyase depolymerase domains

(2017) Hugo Oliveira et al.   ENVIRONMENTAL MICROBIOLOGY

Novel Fri1-like Viruses Infecting Acinetobacter baumannii—vB_AbaP_AS11 and vB_AbaP_AS12—Characterization, Comparative Genomic Analysis, and Host-Recognition Strategy.

(2017) Anastasia Popova et al.   Viruses-Basel

Structural basis for fragmenting the exopolysaccharide of Acinetobacter baumannii by bacteriophage ΦAB6 tailspike protein

(2017) I-Ming Lee et al.   Scientific Reports

Bacteriophage-encoded depolymerases: their diversity and biotechnological applications

(2016) Diana P. Pires et al.   APPLIED MICROBIOLOGY AND BIOTECHNOLOGY

Structure of the T4 baseplate and its function in triggering sheath contraction

(2016) Nicholas M. I. Taylor et al.   NATURE

Structural determination of the K14 capsular polysaccharide from an ST25 Acinetobacter baumannii isolate, D46

(2015) Johanna J. Kenyon et al.   CARBOHYDRATE RESEARCH

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Complete Genome and Phenome of a Community-Acquired Acinetobacter baumannii

(2013) Daniel N. Farrugia et al.   PLoS One

Variation in the Complex Carbohydrate Biosynthesis Loci of Acinetobacter baumannii Genomes

(2013) Johanna J. Kenyon et al.   PLoS One

Automatic protein structure solution from weak X-ray data

(2013) Pavol Skubák et al.   Nature Communications

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS

XDS

(2010) Wolfgang Kabsch   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

The role of interactions between phage and bacterial proteins within the infected cell: a diverse and puzzling interactome

(2009) Bart Roucourt et al.   ENVIRONMENTAL MICROBIOLOGY

The RAST Server: Rapid Annotations using Subsystems Technology

(2008) Ramy K Aziz et al.   BMC GENOMICS

CDD: specific functional annotation with the Conserved Domain Database

(2008) A. Marchler-Bauer et al.   NUCLEIC ACIDS RESEARCH