Climate warming has direct and indirect effects on microbes associated with carbon cycling in northern lakes

Microbiome assembly in thawing permafrost and its feedbacks to climate

(2022) Jessica G. Ernakovich et al.   GLOBAL CHANGE BIOLOGY

Methanogenesis exceeds CH 4 consumption in eutrophic lake sediments

(2021) Sofia L. D'Ambrosio et al.   Limnology and Oceanography Letters

Thaw Transitions and Redox Conditions Drive Methane Oxidation in a Permafrost Peatland

(2020) Clarice R. Perryman et al.   Journal of Geophysical Research-Biogeosciences

Metagenome-assembled genome distribution and key functionality highlight importance of aerobic metabolism in Svalbard permafrost

(2020) Yaxin Xue et al.   FEMS MICROBIOLOGY ECOLOGY

Roles of Thermokarst Lakes in a Warming World

(2020) Michiel H. in 't Zandt et al.   TRENDS IN MICROBIOLOGY

Altered microbial structure and function after thermokarst formation

(2020) Futing Liu et al.   GLOBAL CHANGE BIOLOGY

Large‐scale evidence for microbial response and associated carbon release after permafrost thaw

(2020) Yongliang Chen et al.   GLOBAL CHANGE BIOLOGY

Responses of tundra soil microbial communities to half a decade of experimental warming at two critical depths

(2019) Eric R. Johnston et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Ontogenic succession of thermokarst thaw ponds is linked to dissolved organic matter quality and microbial degradation potential

(2019) Sari Peura et al.   LIMNOLOGY AND OCEANOGRAPHY

OUP accepted manuscript

(2018)   BIOINFORMATICS

Physicochemical Drivers of Microbial Community Structure in Sediments of Lake Hazen, Nunavut, Canada

(2018) Matti O. Ruuskanen et al.   Frontiers in Microbiology

GMPR: A robust normalization method for zero-inflated count data with application to microbiome sequencing data

(2018) Li Chen et al.   PeerJ

Decomposition responses to climate depend on microbial community composition

(2018) Sydney I. Glassman et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interactions between regional climate, surficial geology, and topography: Characterizing shallow groundwater systems in sub‐humid, low‐relief landscapes

(2018) K. J. Hokanson et al.   WATER RESOURCES RESEARCH

CO2 evasion from boreal lakes: Revised estimate, drivers of spatial variability, and future projections

(2017) Adam Hastie et al.   GLOBAL CHANGE BIOLOGY

Microbial functional diversity covaries with permafrost thaw-induced environmental heterogeneity in tundra soil

(2017) Mengting M. Yuan et al.   GLOBAL CHANGE BIOLOGY

WorldClim 2: new 1-km spatial resolution climate surfaces for global land areas

(2017) Stephen E. Fick et al.   INTERNATIONAL JOURNAL OF CLIMATOLOGY

Reverse Methanogenesis and Respiration in Methanotrophic Archaea

(2017) Peer H. A. Timmers et al.   ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL

Mechanistic modeling of microbial interactions at pore to profile scale resolve methane emission dynamics from permafrost soil

(2017) Ali Ebrahimi et al.   Journal of Geophysical Research-Biogeosciences

Patterns of hydrologic connectivity in the McMurdo Dry Valleys, Antarctica: a synthesis of 20 years of hydrologic data

(2016) Adam N. Wlostowski et al.   HYDROLOGICAL PROCESSES

Climate-sensitive northern lakes and ponds are critical components of methane release

(2016) Martin Wik et al.   Nature Geoscience

Hydrologic Impacts of Thawing Permafrost—A Review

(2016) Michelle A. Walvoord et al.   VADOSE ZONE JOURNAL

Comparing Apples and Oranges?: Next Generation Sequencing and Its Impact on Microbiome Analysis

(2016) Adam G. Clooney et al.   PLoS One

SUPER-FOCUS: a tool for agile functional analysis of shotgun metagenomic data

(2015) Genivaldo Gueiros Z. Silva et al.   BIOINFORMATICS

Microbial biogeography of permafrost thaw ponds across the changing northern landscape

(2015) Jérôme Comte et al.   ECOGRAPHY

Climate change and the permafrost carbon feedback

(2015) E. A. G. Schuur et al.   NATURE

Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes

(2015) Jenni Hultman et al.   NATURE

Methane suppression by iron and humic acids in soils of the Arctic Coastal Plain

(2015) Kimberley E. Miller et al.   SOIL BIOLOGY & BIOCHEMISTRY

Novel molecular markers for the detection of methanogens and phylogenetic analyses of methanogenic communities

(2015) Lukasz Dziewit et al.   Frontiers in Microbiology

Large-scale patterns in summer diffusive CH4fluxes across boreal lakes, and contribution to diffusive C emissions

(2014) Terhi Rasilo et al.   GLOBAL CHANGE BIOLOGY

Changing hydrologic connectivity due to permafrost thaw in the lower Liard River valley, NWT, Canada

(2014) Ryan F. Connon et al.   HYDROLOGICAL PROCESSES

Methane fluxes show consistent temperature dependence across microbial to ecosystem scales

(2014) Gabriel Yvon-Durocher et al.   NATURE

Microbial Functional Potential and Community Composition in Permafrost-Affected Soils of the NW Canadian Arctic

(2014) Béatrice A. Frank-Fahle et al.   PLoS One

Changes in peat chemistry associated with permafrost thaw increase greenhouse gas production

(2014) S. B. Hodgkins et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage

(2013) Mohamed F. Haroon et al.   NATURE

Metagenomic Insights into Anaerobic Metabolism along an Arctic Peat Soil Profile

(2013) David A. Lipson et al.   PLoS One

Total waterborne carbon export and DOC composition from ten nested subarctic peatland catchments-importance of peatland cover, groundwater influence, and inter-annual variability of precipitation patterns

(2012) David Olefeldt et al.   HYDROLOGICAL PROCESSES

Thermokarst lake, hydrological flow and water balance indicators of permafrost change in Western Siberia

(2012) Johanna Mård Karlsson et al.   JOURNAL OF HYDROLOGY

Preservation of organic matter in sediments promoted by iron

(2012) Karine Lalonde et al.   NATURE

Influence of permafrost distribution on groundwater flow in the context of climate-driven permafrost thaw: Example from Yukon Flats Basin, Alaska, United States

(2012) Michelle A. Walvoord et al.   WATER RESOURCES RESEARCH

Microbial control over carbon cycling in soil

(2012) Joshua P. Schimel et al.   Frontiers in Microbiology

RAPSearch2: a fast and memory-efficient protein similarity search tool for next-generation sequencing data

(2011) Y. Zhao et al.   BIOINFORMATICS

FLASH: fast length adjustment of short reads to improve genome assemblies

(2011) T. Magoc et al.   BIOINFORMATICS

Effects of permafrost and hydrology on the composition and transport of dissolved organic carbon in a subarctic peatland complex

(2011) David Olefeldt et al.   JOURNAL OF GEOPHYSICAL RESEARCH

Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw

(2011) Rachel Mackelprang et al.   NATURE

Temperature-controlled organic carbon mineralization in lake sediments

(2010) Cristian Gudasz et al.   NATURE

Light limitation of nutrient-poor lake ecosystems

(2009) Jan Karlsson et al.   NATURE

Spatial and temporal variations in active layer thawing and their implication on runoff generation in peat-covered permafrost terrain

(2009) Nicole Wright et al.   WATER RESOURCES RESEARCH

Evidence for Incorporation of H2S in Groundwater Fulvic Acids from Stable Isotope Ratios and Sulfur K-edge X-ray Absorption Near Edge Structure Spectroscopy

(2008) Florian Einsiedl et al.   ENVIRONMENTAL SCIENCE & TECHNOLOGY

Impacts of permafrost degradation on arctic river biogeochemistry

(2008) Karen E. Frey et al.   HYDROLOGICAL PROCESSES