Mathematical Formalism of Nonequilibrium Thermodynamics for Nonlinear Chemical Reaction Systems with General Rate Law

Single-Molecule Spectroscopy, Imaging, and Photocontrol: Foundations for Super-Resolution Microscopy (Nobel Lecture)

(2015) W. E. William E. Moerner   ANGEWANDTE CHEMIE-INTERNATIONAL EDITION

Lyapunov Functions, Stationary Distributions, and Non-equilibrium Potential for Reaction Networks

(2015) David F. Anderson et al.   BULLETIN OF MATHEMATICAL BIOLOGY

Irreversible thermodynamics of open chemical networks. I. Emergent cycles and broken conservation laws

(2014) Matteo Polettini et al.   JOURNAL OF CHEMICAL PHYSICS

The zeroth law of thermodynamics and volume-preserving conservative system in equilibrium with stochastic damping

(2014) Hong Qian   PHYSICS LETTERS A

Dissipation, generalized free energy, and a self-consistent nonequilibrium thermodynamics of chemically driven open subsystems

(2013) Hao Ge et al.   PHYSICAL REVIEW E

Landscapes of non-gradient dynamics without detailed balance: Stable limit cycles and multiple attractors

(2012) Hao Ge et al.   CHAOS

Dynamics of the chemical master equation, a strip of chains of equations ind-dimensional space

(2012) Vahe Galstyan et al.   PHYSICAL REVIEW E

Fokker–Planck Equations for a Free Energy Functional or Markov Process on a Graph

(2011) Shui-Nee Chow et al.   ARCHIVE FOR RATIONAL MECHANICS AND ANALYSIS

Irreversible thermodynamics in multiscale stochastic dynamical systems

(2011) Moisés Santillán et al.   PHYSICAL REVIEW E

Stochastic theory of nonequilibrium steady states. Part II: Applications in chemical biophysics

(2011) Hao Ge et al.   PHYSICS REPORTS-REVIEW SECTION OF PHYSICS LETTERS

Physical origins of entropy production, free energy dissipation, and their mathematical representations

(2010) Hao Ge et al.   PHYSICAL REVIEW E

Three Detailed Fluctuation Theorems

(2010) Massimiliano Esposito et al.   PHYSICAL REVIEW LETTERS

Stochastic dynamics and non-equilibrium thermodynamics of a bistable chemical system: the Schlogl model revisited

(2008) M. Vellela et al.   Journal of the Royal Society Interface