Feedback Regulation and Its Efficiency in Biochemical Networks

Environmental sensing, information transfer, and cellular decision-making

(2014) Clive G Bowsher et al.   CURRENT OPINION IN BIOTECHNOLOGY

Noise decomposition of intracellular biochemical signaling networks using nonequivalent reporters

(2014) Alex Rhee et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Noise Propagation in Synthetic Gene Circuits for Metabolic Control

(2014) Diego A. Oyarzún et al.   ACS Synthetic Biology

Decomposing Noise in Biochemical Signaling Systems Highlights the Role of Protein Degradation

(2013) Michał Komorowski et al.   BIOPHYSICAL JOURNAL

Encoding and Decoding Cellular Information through Signaling Dynamics

(2013) Jeremy E. Purvis et al.   CELL

The Fidelity of Dynamic Signaling by Noisy Biomolecular Networks

(2013) Clive G. Bowsher et al.   PLoS Computational Biology

Stochastic expression dynamics of a transcription factor revealed by single-molecule noise analysis

(2012) Zach Hensel et al.   NATURE STRUCTURAL & MOLECULAR BIOLOGY

Using Temporal Correlations and Full Distributions to Separate Intrinsic and Extrinsic Fluctuations in Biological Systems

(2012) Andreas Hilfinger et al.   PHYSICAL REVIEW LETTERS

Identifying sources of variation and the flow of information in biochemical networks

(2012) C. G. Bowsher et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Interpretations of Directed Information in Portfolio Theory, Data Compression, and Hypothesis Testing

(2011) Haim H. Permuter et al.   IEEE TRANSACTIONS ON INFORMATION THEORY

The Value of Information for Populations in Varying Environments

(2011) Olivier Rivoire et al.   JOURNAL OF STATISTICAL PHYSICS

Separating intrinsic from extrinsic fluctuations in dynamic biological systems

(2011) A. Hilfinger et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Functional roles for noise in genetic circuits

(2010) Avigdor Eldar et al.   NATURE

Fundamental limits on the suppression of molecular fluctuations

(2010) Ioannis Lestas et al.   NATURE

Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells

(2010) Y. Taniguchi et al.   SCIENCE

BglBricks: A flexible standard for biological part assembly

(2010) J Christopher Anderson et al.   Journal of Biological Engineering

Quantifying Origins of Cell-to-Cell Variations in Gene Expression

(2008) Julia Rausenberger et al.   BIOPHYSICAL JOURNAL

Estimation of the Source-by-Source Effect of Autorepression on Genetic Noise

(2008) Hiroyuki Okano et al.   BIOPHYSICAL JOURNAL

Nature, Nurture, or Chance: Stochastic Gene Expression and Its Consequences

(2008) Arjun Raj et al.   CELL

The stochastic nature of biochemical networks

(2008) Vahid Shahrezaei et al.   CURRENT OPINION IN BIOTECHNOLOGY

Effects of Molecular Memory and Bursting on Fluctuations in Gene Expression

(2008) J. M. Pedraza et al.   SCIENCE

Epigenetic gene expression noise and phenotypic diversification of clonal cell populations

(2007) Thi My Anh Neildez-Nguyen et al.   DIFFERENTIATION