Occurrence and Genomic Characterization of mcr-1-Harboring Escherichia coli Isolates from Chicken and Pig Farms in Lima, Peru

Characterization of Genetic Elements Carrying mcr-1 Gene in Escherichia coli from the Community and Hospital Settings in Vietnam

(2022) Bich Vu Thi Ngoc et al.   Microbiology Spectrum

Comprehensive Genomic Investigation of Coevolution of mcr genes in Escherichia coli Strains via Nanopore Sequencing

(2021) Ruichao Li et al.   GLOBAL CHALLENGES

Market Chickens as a Source of Antibiotic-Resistant Escherichia coli in a Peri-Urban Community in Lima, Peru

(2021) Matthew Murray et al.   Frontiers in Microbiology

Access to antibiotics: not a problem in some LMICs

(2021) Giorgia Sulis et al.   Lancet Global Health

mcr-1 Identified in Fecal Escherichia coli and Avian Pathogenic E. coli (APEC) From Brazil

(2021) Nicolle Lima Barbieri et al.   Frontiers in Microbiology

mcr-1 Gene in Latin America: How Is It Disseminated Among Humans, Animals, and the Environment?

(2021) Silvia Adriana Mayer Lentz et al.   Frontiers in Public Health

Prevalence and risk factors for faecal carriage of multidrug resistant Escherichia coli among slaughterhouse workers

(2021) Mabel Kamweli Aworh et al.   Scientific Reports

Whole-Genome Analysis of a High-Risk Clone of Klebsiella pneumoniae ST147 Carrying Both mcr-1 and blaNDM-1 Genes in Peru

(2021) Edgar Gonzales-Escalante et al.   Microbial Drug Resistance

PLSDB: advancing a comprehensive database of bacterial plasmids

(2021) Georges P Schmartz et al.   NUCLEIC ACIDS RESEARCH

Genomic data reveal international lineages of critical priority Escherichia coli harbouring wide resistome in Andean condors ( Vultur gryphus Linnaeus, 1758)

(2020) Danny Fuentes‐Castillo et al.   MOLECULAR ECOLOGY

Multidrug resistant Escherichia coli harboring mcr-1 and blaCTX-M isolated from swine in Argentina

(2019) Diego Faccone et al.   Journal of Global Antimicrobial Resistance

Virulence factors, prevalence and potential transmission of extraintestinal pathogenic Escherichia coli isolated from different sources: recent reports

(2019) Jolanta Sarowska et al.   Gut Pathogens

Co-occurrence of clinically relevant β-lactamases and MCR-1 encoding genes in Escherichia coli from companion animals in Argentina

(2019) María Valeria Rumi et al.   VETERINARY MICROBIOLOGY

Identification of a novel hybrid plasmid coproducing MCR-1 and MCR-3 variant from an Escherichia coli strain

(2019) Ruichao Li et al.   JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY

Updated Prevalence of mcr-Like Genes among Escherichia coli and Klebsiella pneumoniae in the SENTRY Program and Characterization of mcr-1.11 Variant

(2019) Lalitagauri M. Deshpande et al.   ANTIMICROBIAL AGENTS AND CHEMOTHERAPY

Plasmid-mediated colistin resistance in Latin America and Caribbean: A systematic review

(2019) Victor Rocha Mendes Oliveira et al.   Travel Medicine and Infectious Disease

First three Escherichia coli isolates harboring mcr-1 in Uruguay

(2019) Romina Papa-Ezdra et al.   Journal of Global Antimicrobial Resistance

Global trends in antimicrobial resistance in animals in low- and middle-income countries

(2019) Thomas P. Van Boeckel et al.   SCIENCE

oriTfinder: a web-based tool for the identification of origin of transfers in DNA sequences of bacterial mobile genetic elements

(2018) Xiaobin Li et al.   NUCLEIC ACIDS RESEARCH

The Birth and Demise of the ISApl1-mcr-1-ISApl1 Composite Transposon: the Vehicle for Transferable Colistin Resistance

(2018) Erik Snesrud et al.   mBio

The global distribution and spread of the mobilized colistin resistance gene mcr-1

(2018) Ruobing Wang et al.   Nature Communications

Escherichia coli used as a biomarker of antimicrobial resistance in pig farms of Southern Brazil

(2018) Maiara Cristiane Brisola et al.   SCIENCE OF THE TOTAL ENVIRONMENT

Global phylogenetic analysis of Escherichia coli and plasmids carrying the mcr-1 gene indicates bacterial diversity but plasmid restriction

(2017) Sébastien Matamoros et al.   Scientific Reports

Colistin use and colistin resistance in bacteria from animals

(2016) Isabelle Kempf et al.   INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS

Emergence of plasmid-mediated colistin resistance mechanism MCR-1 in animals and human beings in China: a microbiological and molecular biological study

(2016) Yi-Yun Liu et al.   LANCET INFECTIOUS DISEASES

ggtree: anrpackage for visualization and annotation of phylogenetic trees with their covariates and other associated data

(2016) Guangchuang Yu et al.   Methods in Ecology and Evolution

Characterisation of Commensal Escherichia coli Isolated from Apparently Healthy Cattle and Their Attendants in Tanzania

(2016) Balichene P. Madoshi et al.   PLoS One

Global trends in antimicrobial use in food animals

(2015) Thomas P. Van Boeckel et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Prokka: rapid prokaryotic genome annotation

(2014) T. Seemann   BIOINFORMATICS

Trimmomatic: a flexible trimmer for Illumina sequence data

(2014) Anthony M. Bolger et al.   BIOINFORMATICS

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins

(2014) Nicholas J. Croucher et al.   NUCLEIC ACIDS RESEARCH

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

(2012) Anton Bankevich et al.   JOURNAL OF COMPUTATIONAL BIOLOGY

Easyfig: a genome comparison visualizer

(2011) M. J. Sullivan et al.   BIOINFORMATICS

BLAST Ring Image Generator (BRIG): simple prokaryote genome comparisons

(2011) Nabil-Fareed Alikhan et al.   BMC GENOMICS