OrganelX web server for sub-peroxisomal and sub-mitochondrial protein localization and peroxisomal target signal detection

Insights Into the Peroxisomal Protein Inventory of Zebrafish

(2022) Maki Kamoshita et al.   Frontiers in Physiology

Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences

(2021) Alexander Rives et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

In-Pero: Exploiting Deep Learning Embeddings of Protein Sequences to Predict the Localisation of Peroxisomal Proteins

(2021) Marco Anteghini et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

DeepPred-SubMito: A Novel Submitochondrial Localization Predictor Based on Multi-Channel Convolutional Neural Network and Dataset Balancing Treatment

(2020) Xiao Wang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

Machine Learning Model for Identifying Antioxidant Proteins Using Features Calculated from Primary Sequences

(2020) Luu Ho Thanh Lam et al.   Biology-Basel

UniProt: the universal protein knowledgebase in 2021

(2020) et al.   NUCLEIC ACIDS RESEARCH

DeepMito: accurate prediction of protein sub-mitochondrial localization using convolutional neural networks

(2019) Castrense Savojardo et al.   BIOINFORMATICS

Unified rational protein engineering with sequence-based deep representation learning

(2019) Ethan C. Alley et al.   NATURE METHODS

Modeling aspects of the language of life through transfer-learning protein sequences

(2019) Michael Heinzinger et al.   BMC BIOINFORMATICS

The peroxisome: an update on mysteries 2.0

(2018) Markus Islinger et al.   HISTOCHEMISTRY AND CELL BIOLOGY

Peroxisomal ABC transporters: functions and mechanism

(2015) A. Baker et al.   BIOCHEMICAL SOCIETY TRANSACTIONS

TPpred3 detects and discriminates mitochondrial and chloroplastic targeting peptides in eukaryotic proteins

(2015) Castrense Savojardo et al.   BIOINFORMATICS

Lipid Droplets and Peroxisomes: Key Players in Cellular Lipid Homeostasis or A Matter of Fat--Store 'em Up or Burn 'em Down

(2012) S. D. Kohlwein et al.   GENETICS

The peroxisome: an update on mysteries

(2012) Markus Islinger et al.   HISTOCHEMISTRY AND CELL BIOLOGY

Repeated double cross validation

(2009) Peter Filzmoser et al.   JOURNAL OF CHEMOMETRICS

PeroxisomeDB 2.0: an integrative view of the global peroxisomal metabolome

(2009) Agatha Schlüter et al.   NUCLEIC ACIDS RESEARCH

InterPro: the integrative protein signature database

(2008) S. Hunter et al.   NUCLEIC ACIDS RESEARCH