Plastid genome sequences of Gymnochlora stellata, Lotharella vacuolata, and Partenskyella glossopodia reveal remarkable structural conservation among chlorarachniophyte species

The chloroplast genomes of Bryopsis plumosa and Tydemania expeditiones (Bryopsidales, Chlorophyta): compact genomes and genes of bacterial origin

(2015) Frederik Leliaert et al.   BMC GENOMICS

Nucleomorph Genome Sequences of Two Chlorarachniophytes, Amorphochlora amoebiformis and Lotharella vacuolata

(2015) Shigekatsu Suzuki et al.   Genome Biology and Evolution

Dynamic Evolution of the Chloroplast Genome in the Green Algal Classes Pedinophyceae and Trebouxiophyceae

(2015) Monique Turmel et al.   Genome Biology and Evolution

YCF1: A Green TIC?

(2015) Jan de Vries et al.   PLANT CELL

The Plastid Genome of the Cryptomonad Teleaulax amphioxeia

(2015) Jong Im Kim et al.   PLoS One

Six newly sequenced chloroplast genomes from prasinophyte green algae provide insights into the relationships among prasinophyte lineages and the diversity of streamlined genome architecture in picoplanktonic species

(2014) Claude Lemieux et al.   BMC GENOMICS

Nucleomorph and plastid genome sequences of the chlorarachniophyte Lotharella oceanica: convergent reductive evolution and frequent recombination in nucleomorph-bearing algae

(2014) Goro Tanifuji et al.   BMC GENOMICS

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

Plastid survival in the cytosol of animal cells

(2014) Jan de Vries et al.   TRENDS IN PLANT SCIENCE

MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0

(2013) Koichiro Tamura et al.   MOLECULAR BIOLOGY AND EVOLUTION

Uncovering the Protein Translocon at the Chloroplast Inner Envelope Membrane

(2013) S. Kikuchi et al.   SCIENCE

UniMoG--a unifying framework for genomic distance calculation and sorting based on DCJ

(2012) R. Hilker et al.   BIOINFORMATICS

Algal genomes reveal evolutionary mosaicism and the fate of nucleomorphs

(2012) Bruce A. Curtis et al.   NATURE

Cyanophora paradoxa Genome Elucidates Origin of Photosynthesis in Algae and Plants

(2012) D. C. Price et al.   SCIENCE

MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space

(2012) Fredrik Ronquist et al.   SYSTEMATIC BIOLOGY

The Chloroplast Genome of the Green Alga Schizomeris leibleinii (Chlorophyceae) Provides Evidence for Bidirectional DNA Replication from a Single Origin in the Chaetophorales

(2011) Jean-Simon Brouard et al.   Genome Biology and Evolution

The evolution of the plastid chromosome in land plants: gene content, gene order, gene function

(2011) Susann Wicke et al.   PLANT MOLECULAR BIOLOGY

The Bryopsis hypnoides Plastid Genome: Multimeric Forms and Complete Nucleotide Sequence

(2011) Fang Lü et al.   PLoS One

The endosymbiotic origin, diversification and fate of plastids

(2010) P. J. Keeling   PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES

The Puzzle of Plastid Evolution

(2009) John M. Archibald   CURRENT BIOLOGY

Going, Going, Not Quite Gone: Nucleomorphs as a Case Study in Nuclear Genome Reduction

(2009) J. M. Archibald et al.   JOURNAL OF HEREDITY

The Chloroplast Genomes of the Green Algae Pedinomonas minor, Parachlorella kessleri, and Oocystis solitaria Reveal a Shared Ancestry between the Pedinomonadales and Chlorellales

(2009) M. Turmel et al.   MOLECULAR BIOLOGY AND EVOLUTION

Plastid Evolution

(2008) Sven B. Gould et al.   Annual Review of Plant Biology

Recent developments in the MAFFT multiple sequence alignment program

(2008) K. Katoh et al.   BRIEFINGS IN BIOINFORMATICS