Mitochondrial phylogenomics reveals deep relationships of scarab beetles (Coleoptera, Scarabaeidae)

Seven new mitochondrial genomes of phytophagous scarab beetles (Coleoptera: Scarabaeidae) and phylogenetic implications

(2022) YUJIE LI et al.   ZOOTAXA

Integrated phylogenomics and fossil data illuminate the evolution of beetles

(2022) Chenyang Cai et al.   Royal Society Open Science

Management of Popillia japonica in container-grown nursery stock in Italy

(2021) Nicola Mori et al.   PHYTOPARASITICA

The Mitochondrial Genomes of 18 New Pleurosticti (Coleoptera: Scarabaeidae) Exhibit a Novel trnQ-NCR-trnI-trnM Gene Rearrangement and Clarify Phylogenetic Relationships of Subfamilies within Scarabaeidae

(2021) Sam Pedro Galilee Ayivi et al.   Insects

The mitochondrial genome of the dung beetle, Copris tripartitus, with mitogenomic comparisons within Scarabaeidae (Coleoptera)

(2019) Jun Seong Jeong et al.   INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

(2018) Sudhir Kumar et al.   MOLECULAR BIOLOGY AND EVOLUTION

OUP accepted manuscript

(2018)   JOURNAL OF INSECT SCIENCE

ModelFinder: fast model selection for accurate phylogenetic estimates

(2017) Subha Kalyaanamoorthy et al.   NATURE METHODS

Multigene phylogenetic analysis redefines dung beetles relationships and classification (Coleoptera: Scarabaeidae: Scarabaeinae)

(2016) Sergei Tarasov et al.   BMC EVOLUTIONARY BIOLOGY

Phylogenetics and biogeography of the dung beetle genus Onthophagus inferred from mitochondrial genomes

(2016) Thijmen Breeschoten et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

If Dung Beetles (Scarabaeidae: Scarabaeinae) Arose in Association with Dinosaurs, Did They Also Suffer a Mass Co-Extinction at the K-Pg Boundary?

(2016) Nicole L. Gunter et al.   PLoS One

Family-Level Sampling of Mitochondrial Genomes in Coleoptera: Compositional Heterogeneity and Phylogenetics

(2015) Martijn J. T. N. Timmermans et al.   Genome Biology and Evolution

The beetle tree of life reveals that Coleoptera survived end-Permian mass extinction to diversify during the Cretaceous terrestrial revolution

(2015) DUANE D. MCKENNA et al.   SYSTEMATIC ENTOMOLOGY

Innovative Bayesian and Parsimony Phylogeny of Dung Beetles (Coleoptera, Scarabaeidae, Scarabaeinae) Enhanced by Ontology-Based Partitioning of Morphological Characters

(2015) Sergei Tarasov et al.   PLoS One

FASconCAT-G: extensive functions for multiple sequence alignment preparations concerning phylogenetic studies

(2014) Patrick Kück et al.   Frontiers in Zoology

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

(2014) Lam-Tung Nguyen et al.   MOLECULAR BIOLOGY AND EVOLUTION

The Evolution of Morphospace in Phytophagous Scarab Chafers: No Competition - No Divergence?

(2014) Jonas Eberle et al.   PLoS One

Phylogeny and evolution of Staphyliniformia and Scarabaeiformia: forest litter as a stepping stone for diversification of nonphytophagous beetles

(2014) DUANE D. MCKENNA et al.   SYSTEMATIC ENTOMOLOGY

Insect Mitochondrial Genomics: Implications for Evolution and Phylogeny

(2013) Stephen L. Cameron   Annual Review of Entomology

Ultrafast Approximation for Phylogenetic Bootstrap

(2013) B. Q. Minh et al.   MOLECULAR BIOLOGY AND EVOLUTION

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

(2013) K. Katoh et al.   MOLECULAR BIOLOGY AND EVOLUTION

A comprehensive analysis of bilaterian mitochondrial genomes and phylogeny

(2013) Matthias Bernt et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

PhyloBayes MPI: Phylogenetic Reconstruction with Infinite Mixtures of Profiles in a Parallel Environment

(2013) Nicolas Lartillot et al.   SYSTEMATIC BIOLOGY

Separating the wheat from the chaff: mitigating the effects of noise in a plastome phylogenomic data set from Pinus L. (Pinaceae)

(2012) Matthew Parks et al.   BMC EVOLUTIONARY BIOLOGY

Isolation and Identification of Cellulolytic Bacteria from the Gut of Holotrichia parallela Larvae (Coleoptera: Scarabaeidae)

(2012) Shengwei Huang et al.   INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

(2012) Ravi K. Patel et al.   PLoS One

The Evolutionary Root of Flowering Plants

(2012) Vadim V. Goremykin et al.   SYSTEMATIC BIOLOGY

Phylogeny of the Coleoptera Based on Morphological Characters of Adults and Larvae

(2011) John F. Lawrence et al.   ANNALES ZOOLOGICI

Phylogenetic analyses reveal reliable morphological markers to classify mega-diversity in Onthophagini dung beetles (Coleoptera: Scarabaeidae: Scarabaeinae)

(2011) Sergey I. Tarasov et al.   CLADISTICS

Systematic Error in Seed Plant Phylogenomics

(2011) Bojian Zhong et al.   Genome Biology and Evolution

Family-Group Names In Coleoptera (Insecta)

(2011) Patrice Bouchard et al.   ZooKeys

Automated Removal of Noisy Data in Phylogenomic Analyses

(2010) Vadim V. Goremykin et al.   JOURNAL OF MOLECULAR EVOLUTION

Did dung beetles arise in Africa? A phylogenetic hypothesis based on five gene regions

(2010) Catherine L. Sole et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION

TranslatorX: multiple alignment of nucleotide sequences guided by amino acid translations

(2010) Federico Abascal et al.   NUCLEIC ACIDS RESEARCH

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

(2009) S. Capella-Gutierrez et al.   BIOINFORMATICS

Towards the phylogeny of chafers (Sericini): Analysis of alignment-variable sequences and the evolution of segment numbers in the antennal club

(2008) Dirk Ahrens et al.   MOLECULAR PHYLOGENETICS AND EVOLUTION