Strengthening of enterococcal biofilms by Esp

ColabFold: making protein folding accessible to all

(2022) Milot Mirdita et al.   NATURE METHODS

Search and sequence analysis tools services from EMBL-EBI in 2022

(2022) Fábio Madeira et al.   NUCLEIC ACIDS RESEARCH

Periscope Proteins are variable-length regulators of bacterial cell surface interactions

(2021) Fiona Whelan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Procleave: Predicting Protease-specific Substrate Cleavage Sites by Combining Sequence and Structural Information

(2020) Fuyi Li et al.   GENOMICS PROTEOMICS & BIOINFORMATICS

The biofilm-associated surface protein Esp of Enterococcus faecalis forms amyloid-like fibers

(2020) Agustina Taglialegna et al.   npj Biofilms and Microbiomes

Enterococcus faecalis Polymicrobial Interactions Facilitate Biofilm Formation, Antibiotic Recalcitrance, and Persistent Colonization of the Catheterized Urinary Tract

(2020) Jordan R. Gaston et al.   Pathogens

ATSAS 3.0: expanded functionality and new tools for small-angle scattering data analysis

(2020) Karen Manalastas-Cantos et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

SignalP 5.0 improves signal peptide predictions using deep neural networks

(2019) José Juan Almagro Armenteros et al.   NATURE BIOTECHNOLOGY

Augmentation of Urinary Lactoferrin Enhances Host Innate Immune Clearance of Uropathogenic Escherichia coli

(2019) Kathryn A. Patras et al.   Journal of Innate Immunity

Bacterial Amyloids: The Link between Bacterial Infections and Autoimmunity

(2019) Lauren Nicastro et al.   TRENDS IN MICROBIOLOGY

DALI and the persistence of protein shape

(2019) Liisa Holm   PROTEIN SCIENCE

Defining the remarkable structural malleability of a bacterial surface protein Rib domain implicated in infection

(2019) Fiona Whelan et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Glycan recognition at the saliva – Oral microbiome interface

(2018) Benjamin W. Cross et al.   CELLULAR IMMUNOLOGY

Functional Amyloid and Other Protein Fibers in the Biofilm Matrix

(2018) Elliot Erskine et al.   JOURNAL OF MOLECULAR BIOLOGY

Hyperexpandable, self-healing macromolecular crystals with integrated polymer networks

(2018) Ling Zhang et al.   NATURE

Biofilm-associated infection by enterococci

(2018) Jun-Hong Ch’ng et al.   NATURE REVIEWS MICROBIOLOGY

Transcriptomics Analysis Reveals Putative Genes Involved in Biofilm Formation and Biofilm-associated Drug Resistance of Enterococcus faecalis

(2017) Chaminda J. Seneviratne et al.   JOURNAL OF ENDODONTICS

Functional amyloids in Streptococcus mutans, their use as targets of biofilm inhibition and initial characterization of SMU_63c

(2017) Richard N Besingi et al.   MICROBIOLOGY-SGM

FoXS, FoXSDock and MultiFoXS: Single-state and multi-state structural modeling of proteins and their complexes based on SAXS profiles

(2016) Dina Schneidman-Duhovny et al.   NUCLEIC ACIDS RESEARCH

Enterococcus faecalis readily colonizes the entire gastrointestinal tract and forms biofilms in a germ-free mouse model

(2016) Aaron M. T. Barnes et al.   Virulence

Staphylococcal Bap Proteins Build Amyloid Scaffold Biofilm Matrices in Response to Environmental Signals

(2016) Agustina Taglialegna et al.   PLoS Pathogens

A refined technique for extraction of extracellular matrices from bacterial biofilms and its applicability

(2014) Akio Chiba et al.   Microbial Biotechnology

Virulence factors in clinical and commensal isolates of Enterococcus species

(2013) Sistla Sujatha et al.   Indian Journal of Pathology and Microbiology

Implementation and performance of SIBYLS: a dual endstation small-angle X-ray scattering and macromolecular crystallography beamline at the Advanced Light Source

(2013) Scott Classen et al.   JOURNAL OF APPLIED CRYSTALLOGRAPHY

Characterization of Fibrinogen Binding by Glycoproteins Srr1 and Srr2 ofStreptococcus agalactiae

(2013) Ho Seong Seo et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

NIH Image to ImageJ: 25 years of image analysis

(2012) Caroline A Schneider et al.   NATURE METHODS

Hospital and Community Ampicillin-Resistant Enterococcus faecium Are Evolutionarily Closely Linked but Have Diversified through Niche Adaptation

(2012) Marieke J. A. de Regt et al.   PLoS One

Structure-based model of allostery predicts coupling between distant sites

(2012) P. Weinkam et al.   PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA

Enterococcus faecalis Produces Abundant Extracellular Structures Containing DNA in the Absence of Cell Lysis during Early Biofilm Formation

(2012) A. M. T. Barnes et al.   mBio

Overview of theCCP4 suite and current developments

(2011) Martyn D. Winn et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

Characterizing flexible and intrinsically unstructured biological macromolecules by SAS using the Porod-Debye law

(2011) Robert P. Rambo et al.   BIOPOLYMERS

Crystal Structure of the C-terminal Region ofStreptococcus mutansAntigen I/II and Characterization of Salivary Agglutinin Adherence Domains

(2011) Matthew R. Larson et al.   JOURNAL OF BIOLOGICAL CHEMISTRY

The changing faces of Streptococcus antigen I/II polypeptide family adhesins

(2010) L. Jeannine Brady et al.   MOLECULAR MICROBIOLOGY

FoXS: a web server for rapid computation and fitting of SAXS profiles

(2010) D. Schneidman-Duhovny et al.   NUCLEIC ACIDS RESEARCH

Crystal structure of the functional region of Uro-adherence factor A from Staphylococcus saprophyticus reveals participation of the B domain in ligand binding

(2010) Eriko Matsuoka et al.   PROTEIN SCIENCE

Decision-making in structure solution using Bayesian estimates of map quality: thePHENIX AutoSolwizard

(2009) Thomas C. Terwilliger et al.   ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY

The Fibrinogen- and Fibronectin-Binding Domains of Staphylococcus aureus Fibronectin-Binding Protein A Synergistically Promote Endothelial Invasion and Experimental Endocarditis

(2008) L. Piroth et al.   INFECTION AND IMMUNITY